Gene Mext_0941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0941 
Symbol 
ID5834141 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp1018645 
End bp1019397 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content72% 
IMG OID641366723 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_001638417 
Protein GI163850374 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0224398 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.101209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTTTTT CCCCGGACAG CTCCCTGGCT GAGGCTGTCG TCGCCTCGCC GAACCGCGGC 
GCGCGGGTCG GGGACAGCCT CGACATGCTG ATCCTGCACT ACACGGGCAT GCCGACGGCG
CAGGGTGCGC TGGAGCGCCT GTGCGACCCA TCCGCCGAGG TCTCGGCCCA TTACTTCGTG
TTCGAGGACG GACGCGTCGT GCAGATGGTG CCGGAGGCCG ACCGGGCCTG GCACGCGGGC
GCCGGAGCCT GGGCGGGCGT GCGCGACATC AACTCCCGCT CCATCGGCAT CGAGATCGCC
CATCCCGGCC ATGCCGGCGG GCTGCCGCCC TATCCGGAGG CGCAGATCGC CGCGGTCATC
GCGCTGGCCC GCGACATCGT CCTCCGCCAC GCGATCCCCG GCCCTCGCGT GCTCGCCCAT
TCCGACGTGG CGCCCGCACG CAAGGAGGAT CCGGGCGAAG ACTTTCCCTG GGAGCGGCTG
GCGCGTGAGG GCGTCGGGCA CTGGGTGCCG CCGGCGCCCG TGCGGGATGG CCGCTTCTTC
GCGATGGGCG ACACCGGCCA GCCGGTCGAG GCCCTGCAGG CGATGTTGGC GCTCTACGGC
TACGAGCAGC CGGTCACCGG CCACTTCGAC GCGGCGATGC GCGCGGTCGT CACCGCCTTC
CAGCGCCATT TCCGGCCGGC CCGCATCGAC GGCGTCGCGG ATTCCTCCAC GATCACGACC
CTGCGCGATC TGATCGCCTC CCGGCCGGCC TAA
 
Protein sequence
MSFSPDSSLA EAVVASPNRG ARVGDSLDML ILHYTGMPTA QGALERLCDP SAEVSAHYFV 
FEDGRVVQMV PEADRAWHAG AGAWAGVRDI NSRSIGIEIA HPGHAGGLPP YPEAQIAAVI
ALARDIVLRH AIPGPRVLAH SDVAPARKED PGEDFPWERL AREGVGHWVP PAPVRDGRFF
AMGDTGQPVE ALQAMLALYG YEQPVTGHFD AAMRAVVTAF QRHFRPARID GVADSSTITT
LRDLIASRPA