| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0940 |
|---|
| Symbol | |
|---|
| ID | 5834140 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 1016970 |
|---|
| End bp | 1018547 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641366722 |
|---|
| Product | sodium/hydrogen exchanger |
|---|
| Protein accession | YP_001638416 |
|---|
| Protein GI | 163850373 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0025] NhaP-type Na+/H+ and K+/H+ antiporters |
|---|
| TIGRFAM ID | [TIGR00831] Na+/H+ antiporter, bacterial form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.10336 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 0.23886 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGTGT TCCACTGGAT CGTCGGCGTC TTGGTCGGCG CGGTTCTGCT CGCTGCCCTG
GCGCGGCGCC TGCGCGCGCC CTATCCCGCC TTCCTCGCCC TGGGCGGTGT CGGGCTCGCC
TTCGTGCCCG GCGTGCCGAG CCTCACGCTC GATCCGGAGC TGGCGCTCGC CCTGTTCCTC
GCGCCGGTTC TGATGGATGC CGGCTACAGC ACGTCGCTGC GCGACCTCGT GCGCAATGCC
CGCCCCATCG CCGGGCTCGC CGTCGGCGCG GTGGCGGCGA CGACCGCGGC GGTCGCGGCG
GTCGCTTTGT GGCTCGTGCC GGACATGCCG CTTGCGGCCG CCATCGTGCT CGGGGCGATT
GTCGCTCCGC CGGACGCCGT GGCGGCTTTG TCGGTGCTCA ACCACGTCTC CCTGCCGCAC
CGCCTCGCCA CGATCCTGCG CGGCGAGAGC CTTCTGAACG ACGCTGCCTC GCTGCTGATC
TACCGGCTCG GGGTGGCGGC GGCGATGACC GGCCATTTCG CCTTTGCCGA GGTGGCGCCG
GCCTTCCTGA TCGGTGTCGT CGGCAGCCTC GTGGCGGGGC CGCTCGCCGC GCTCGTCTAC
CTGCGGATCC TGCGCCGCGT CGATGAGCCG GCCAGCGTCA TCGTGCTGCA ATTCGCGGCT
GCCTTCGGCC TCTGGATCGC CGCCGAGGCG ATGGAGCTGT CCGGGGTGCT CACCGTAGTC
AGCTTCGCGA TCACCGTCGC CCGCTACGCC CCCGGCCAGA CCTCGCCGCG CCCGCGCGTG
ATCTCGAACG CGGTCTGGGA AACGGCGATC TTCGTGCTCA ACGTCCTCGC CTTCGTGCTG
ATCGGCGAGC AGATCGGGCC GATCCTGGCG CGGATGACGC CCGAGCAGGA ATTCGCGTAT
GCCTCCGTTG GCGGAGCCGT GGTCGTCACC GTGATCCTCG TTCGCATCGC CTGGGTTTTG
CCGGCGAGCG CCATCCGCCG TGTCGGCTTC GGCATCACCT CTGATCAGCC GGACGATCTT
GGCCCGGCCC GCGATCTCGG TCTCGGCGCC GGCTTTGCCG TCTCGTGGTC GGGGATGCGC
GGCCTCGTCA CCATCGCCAC GGCCTTGGCC CTGCCCGAGG GCGGGCCTGA GGGCGGCGCG
TTTCCCTATC GCGACCTGAT CGTGCTCACC GCCTTCTGCG TGGTGATCGG TACGCTGGTG
CTCCAGGGCT TGAGCCTGCG CCCGATCCTC GGATGGCTCG GGCTGGAGGA TAGCGATCCT
GTCGGCCGCG AGGTCGGCCG GGCGCGGGCC GAGGCCTATG GCGCCGCGGT CGAGGCTCTG
AAGAACGACC GCTCGGAGGC AGCGGATGCC CTGCGCCGGG AGTTCCATGC CGCGCTGGCC
CAGGCCGAAG CGCATGAGGA GGGCCTCGCC CCGGAAGGGC TGCCGACCGA CGAGCCCCGC
CGCCGCGCGA TCCACGCCGC CCGCGACCGC CTCCTGACCC TGCGCCGGAA CGGCCGGATC
GGCGACGATG CTTATCTCGT GCTGGAAGAA GAACTCGATT GGGCCGAACT CAATGCGACG
CCGCGCGGGG AGGCCTGA
|
|---|
| Protein sequence | MFVFHWIVGV LVGAVLLAAL ARRLRAPYPA FLALGGVGLA FVPGVPSLTL DPELALALFL
APVLMDAGYS TSLRDLVRNA RPIAGLAVGA VAATTAAVAA VALWLVPDMP LAAAIVLGAI
VAPPDAVAAL SVLNHVSLPH RLATILRGES LLNDAASLLI YRLGVAAAMT GHFAFAEVAP
AFLIGVVGSL VAGPLAALVY LRILRRVDEP ASVIVLQFAA AFGLWIAAEA MELSGVLTVV
SFAITVARYA PGQTSPRPRV ISNAVWETAI FVLNVLAFVL IGEQIGPILA RMTPEQEFAY
ASVGGAVVVT VILVRIAWVL PASAIRRVGF GITSDQPDDL GPARDLGLGA GFAVSWSGMR
GLVTIATALA LPEGGPEGGA FPYRDLIVLT AFCVVIGTLV LQGLSLRPIL GWLGLEDSDP
VGREVGRARA EAYGAAVEAL KNDRSEAADA LRREFHAALA QAEAHEEGLA PEGLPTDEPR
RRAIHAARDR LLTLRRNGRI GDDAYLVLEE ELDWAELNAT PRGEA
|
|---|
| |