Gene Mext_0907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0907 
Symbol 
ID5834387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp981116 
End bp981808 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content71% 
IMG OID641366689 
Productputative transmembrane signal peptide protein 
Protein accessionYP_001638383 
Protein GI163850340 
COG category[R] General function prediction only 
COG ID[COG3577] Predicted aspartyl protease 
TIGRFAM ID[TIGR02281] clan AA aspartic protease, TIGR02281 family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0170092 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTGGG CCGCGCTCGC CATTCTCGGG ATCGGCCTCG CCGTCCTGAT CGCCAACCAT 
GACGGCGGCC CGGTGATGGG GCTCGATTCC GACCAACTCG CCGGCGTCGT GTCGATGACC
GCGCTGCTGC TGCTGCTCGT CGCCGGCCGC TGGCGGCAGG CGCTCGTCAT GCCGGGCAAG
ACCCTGAGTT CGATCCTGAT CTGGCTCGCC ATCGGCGCGG TGATCGTCGT CGGCTACACC
TATCGCGACG ATGCGCAGCG GGTCGGCGCC AATGTCATCG GGGCGCTGCG CCCCGGCACC
GCCATCGTCG GCCCCGGTGG CGAGGTGACG ATCACCCGCC GCTCGGATGG CGATTTCGCC
GTGCTGGCGG CGGTGAATGG CGGCGCCGAG CAGCGCTTCG TCTTCGACAC GGGCGCGAGC
AGCGTCGTGC TCACGGCCGA GACCGCCGAG CGCCTCGGCA TCCGTCCGCC GGAGAGCGCC
TTCACCCAGC GCGTCTCCAC CGCCAACGGC ACGGCGCTCA CCGCGCCGAT CCGGCTCGAC
TCGATCACCG TCGGGCCGAT CACCGAGCGC AACGTCAACG CGATGGTGAG CCGGCCCGGC
GTGCTGACCA CCAACCTGCT CGGCCAGAGC TTCCTCGATC GGTTGCCCTC CTACGAGGTG
CGCGGCGACC GGCTGATCCT GCGCAGCCGC TGA
 
Protein sequence
MMWAALAILG IGLAVLIANH DGGPVMGLDS DQLAGVVSMT ALLLLLVAGR WRQALVMPGK 
TLSSILIWLA IGAVIVVGYT YRDDAQRVGA NVIGALRPGT AIVGPGGEVT ITRRSDGDFA
VLAAVNGGAE QRFVFDTGAS SVVLTAETAE RLGIRPPESA FTQRVSTANG TALTAPIRLD
SITVGPITER NVNAMVSRPG VLTTNLLGQS FLDRLPSYEV RGDRLILRSR