Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0907 |
Symbol | |
ID | 5834387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 981116 |
End bp | 981808 |
Gene Length | 693 bp |
Protein Length | 230 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641366689 |
Product | putative transmembrane signal peptide protein |
Protein accession | YP_001638383 |
Protein GI | 163850340 |
COG category | [R] General function prediction only |
COG ID | [COG3577] Predicted aspartyl protease |
TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0170092 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGTGGG CCGCGCTCGC CATTCTCGGG ATCGGCCTCG CCGTCCTGAT CGCCAACCAT GACGGCGGCC CGGTGATGGG GCTCGATTCC GACCAACTCG CCGGCGTCGT GTCGATGACC GCGCTGCTGC TGCTGCTCGT CGCCGGCCGC TGGCGGCAGG CGCTCGTCAT GCCGGGCAAG ACCCTGAGTT CGATCCTGAT CTGGCTCGCC ATCGGCGCGG TGATCGTCGT CGGCTACACC TATCGCGACG ATGCGCAGCG GGTCGGCGCC AATGTCATCG GGGCGCTGCG CCCCGGCACC GCCATCGTCG GCCCCGGTGG CGAGGTGACG ATCACCCGCC GCTCGGATGG CGATTTCGCC GTGCTGGCGG CGGTGAATGG CGGCGCCGAG CAGCGCTTCG TCTTCGACAC GGGCGCGAGC AGCGTCGTGC TCACGGCCGA GACCGCCGAG CGCCTCGGCA TCCGTCCGCC GGAGAGCGCC TTCACCCAGC GCGTCTCCAC CGCCAACGGC ACGGCGCTCA CCGCGCCGAT CCGGCTCGAC TCGATCACCG TCGGGCCGAT CACCGAGCGC AACGTCAACG CGATGGTGAG CCGGCCCGGC GTGCTGACCA CCAACCTGCT CGGCCAGAGC TTCCTCGATC GGTTGCCCTC CTACGAGGTG CGCGGCGACC GGCTGATCCT GCGCAGCCGC TGA
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Protein sequence | MMWAALAILG IGLAVLIANH DGGPVMGLDS DQLAGVVSMT ALLLLLVAGR WRQALVMPGK TLSSILIWLA IGAVIVVGYT YRDDAQRVGA NVIGALRPGT AIVGPGGEVT ITRRSDGDFA VLAAVNGGAE QRFVFDTGAS SVVLTAETAE RLGIRPPESA FTQRVSTANG TALTAPIRLD SITVGPITER NVNAMVSRPG VLTTNLLGQS FLDRLPSYEV RGDRLILRSR
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