| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0901 |
|---|
| Symbol | |
|---|
| ID | 5834650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 976581 |
|---|
| End bp | 977951 |
|---|
| Gene Length | 1371 bp |
|---|
| Protein Length | 456 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641366683 |
|---|
| Product | glutamate--cysteine ligase |
|---|
| Protein accession | YP_001638377 |
|---|
| Protein GI | 163850334 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG3572] Gamma-glutamylcysteine synthetase |
|---|
| TIGRFAM ID | [TIGR01436] glutamate--cysteine ligase, plant type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.270127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 43 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGCGCG ACACGTCCGA CACCACCCCG CTCACGACGC GGGACGAACT GATCGCGTGG
TTCGCCGCGG GCGAGAAACC GCGCGCGCGG TTCGCGATCG GCACCGAGCA CGAGAAGATC
CCGTTCTACA CCGCCGACCA CATGCCCGTT CCCTATGAGG GCGAGCGCGG CATCCGGGCG
CTTCTGGAAA ATCTCGGCCG GGAGACCGGC TGGGAGCCGA TCCTGGATGC CGGCAACATC
ATCGGTCTAG CGGGACCCGA GGGCAGTGGC GCGATCTCGA TCGAGCCCGG CGGCCAGTTC
GAACTCTCCG GCGCGCCGCT GCCCGACATC CACGCGACCG CGACCGAACT CGACGAGCAT
CTCGCGGCCA CGAAGCGCGC GGCCGAGCCG CTCGGCATTG GCTTCCTCGA CCTCGGCATG
AGTCCGAAAT GGACCCGCGA GGCGACGCCG CAGATGCCGA AGAGCCGCTA CCGCATCATG
CGCAACTACA TGCCCAAGGT GGGCAAGCTC GGCCTCGACA TGATGCTGCG CACCGCGACC
GTGCAGGTGA ACGTCGATTT CGCCTCCGAG GCCGACATGG TGCGCAAGAT GCGCGTCAGC
CTCGCGCTTC AGCCCATCGC CACGGCGCTG TTTGCCAACT CGCCCTTCAC CGACGGGCGG
CCCAACGGCT TCCTGTCGCG CCGCTCGGAG ATCTGGCGCG ACACCGACCC CGACCGCACC
GGCATGCTGG CCTTCACCTT CGATGAGGGC TTCGGCTACG AGGCTTACGC CGATTGGCTG
CTCGACGTGC CGATGTATTT CGTCAAGCGC GGCGAGACCT ACCACGACGT CGCCGGGGCC
TCGTTCCGCG ACCTGATGGC CGGGCGCCTC GCGCAACTGC CGGGCGAGCG GGCCACCGTC
TCGGATTGGG CGAACCACGC CTCCACCGTC TTCCCGGAAG TGCGGCTCAA GCGCTTCCTC
GAAATGCGCG GCGCCGATGT CGGCGGGCCG GCGATGATCG CCGCGCAATC GGCTTTCTGG
GTCGGGCTCC TCTACGACGA GACCGCCCTC TCCGCCGCCT GGGATCTGGT GCGCGGCTGG
TCCGCCAGCG AGCGGGAATC GATGCGCGCC GCCGTGCCGC GGCTCGGGCT TCATGCCAGC
ATCGGCGGGC GCTGTCTCGG CGCGGTCGCG GCGGAGGCGC TCGCCATCGC CCGCACCGGG
CTTCAGGCGC GGGCGCGCCG CGACGGCAAC GGCCGCGACG AGGCGGTCTA TCTCCAGCCG
CTGGAGGCGA TCGTGGCCGC CGGCCGCAGC CACGCGCAGG AGCGGCTCGC CGACTACGAA
GGCCCCTGGG AGAAGTCGGT CGATCCGGCC TTCACCACCT GCACGTTCTG A
|
|---|
| Protein sequence | MARDTSDTTP LTTRDELIAW FAAGEKPRAR FAIGTEHEKI PFYTADHMPV PYEGERGIRA
LLENLGRETG WEPILDAGNI IGLAGPEGSG AISIEPGGQF ELSGAPLPDI HATATELDEH
LAATKRAAEP LGIGFLDLGM SPKWTREATP QMPKSRYRIM RNYMPKVGKL GLDMMLRTAT
VQVNVDFASE ADMVRKMRVS LALQPIATAL FANSPFTDGR PNGFLSRRSE IWRDTDPDRT
GMLAFTFDEG FGYEAYADWL LDVPMYFVKR GETYHDVAGA SFRDLMAGRL AQLPGERATV
SDWANHASTV FPEVRLKRFL EMRGADVGGP AMIAAQSAFW VGLLYDETAL SAAWDLVRGW
SASERESMRA AVPRLGLHAS IGGRCLGAVA AEALAIARTG LQARARRDGN GRDEAVYLQP
LEAIVAAGRS HAQERLADYE GPWEKSVDPA FTTCTF
|
|---|
| |