Gene Mext_0893 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0893 
Symbol 
ID5835830 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp968911 
End bp969993 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content70% 
IMG OID641366675 
Producthypothetical protein 
Protein accessionYP_001638369 
Protein GI163850326 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.932259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value0.840241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACTC GCGCAAACTA CGTCCTGATC GGCGCCTTCA CCATCGGCGT CGTGCTGGCC 
GCCTTCGGCT TCGTGTTCTG GCTCCAGGGC GGCTCCCGGG GACAGGCGAC CCAGGCGCTC
CGCATCGTGT TCTCCGGCTC GGTCGGGGGG CTGGCCAAGG GTTCGACGGT TTCGTTCAAC
GGCATCAAGG TCGGCGAGGC GCTCGACGTG CGCCTGCTGC CGCAGGACCC GCGCCGCGTC
GTGGCGATCG TGCAGGTCGA TCCCTCGACG CCGCTGCGCG CCGACACCCG CGCGCGGCTC
GATTCCGCGA TGCTGACCGG CGTCTCCCAG ATCGCGCTCT CCGGCGGCAG CGCCGACGCG
CCCGCCCTCA CGCCGGGCTC AGGCGACAAG ATGCCGACGA TCTTCGCCGA TTCGAGCGAC
ATTCAGGACA TGATGGCGGC GGCCAAGCAG ATCGCGCAGC GGGCCGACGA CGTGCTCCAG
CGGCTCGACA AGGTGGTGGC CGGCAACGAG GGTGCGATCA CCCGCACCCT CGCCAATGTC
GAGTCCTTCT CGAAGACGCT GGCCGAGGCC GGTCCCTCCA TCGCTGGCCT CGTCAAGTCG
GTGGACGGGC AGCGCCTCAA CCGGGTGATC GAGAACGCCG AGACCTTCTC GACCGCGCTG
GCGAATTCGA GCGGAGATAT CCAGGCCGGG CTGCACGACG CCCGCAGCCT CGCGGCCAAG
CTCAACGCCT CCGCCGACAA GATCGACGGC GTGCTCAAGG GCGCGGAGGG CTTCCTCGGC
TCGGCCTCGG GCCAGCAGGG CGCGGGCACC TTCGCCGAAA TCCGCGAGGC GGCGATCTCC
GTGCGCGACG CCGGCCGGGC GTTCCGGGCG CTGTCGGAGA ACCTCGACAA GCGCACCGCC
AACATCTCCA CGAGCTTCAA CCGCCTGTCG GGTACGAGCC GGCGCGAGGT CGAGGCGCTG
TCGAGCGACG GCCAGCGCAC GCTCAATACC CTGAGCCGGG CGGCCCGCAG CCTGGAGCGC
GACCCATCAC AGGTTATTTT CGGCGGCAAG CCGTCGTTGC CGGAATACAA CGGTGGCCGC
TGA
 
Protein sequence
METRANYVLI GAFTIGVVLA AFGFVFWLQG GSRGQATQAL RIVFSGSVGG LAKGSTVSFN 
GIKVGEALDV RLLPQDPRRV VAIVQVDPST PLRADTRARL DSAMLTGVSQ IALSGGSADA
PALTPGSGDK MPTIFADSSD IQDMMAAAKQ IAQRADDVLQ RLDKVVAGNE GAITRTLANV
ESFSKTLAEA GPSIAGLVKS VDGQRLNRVI ENAETFSTAL ANSSGDIQAG LHDARSLAAK
LNASADKIDG VLKGAEGFLG SASGQQGAGT FAEIREAAIS VRDAGRAFRA LSENLDKRTA
NISTSFNRLS GTSRREVEAL SSDGQRTLNT LSRAARSLER DPSQVIFGGK PSLPEYNGGR