Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0858 |
Symbol | |
ID | 5831275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 936073 |
End bp | 936933 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641366640 |
Product | NLP/P60 protein |
Protein accession | YP_001638334 |
Protein GI | 163850291 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0257977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.028426 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGACA CACGCGATCC CCGCCTCACC CCGGCCCGGC CCGACCTTGC CGACATCCGC CTGAGGGGCG TCGTCACGGC CGAGCGCTAC GTCGCGGGCG AGCCGGCGCG GGTCGCCGTG CCCTCCGCTC CCCTCCGCCG CGCGCCGCGC CTCGAGGCCG GGCTCGAGAC CGAGGCGGTG ATGGGCGACG CCGTGACGGT GTTCGAGATC CGGGACGGAT TCGCCTGGGG CCAGATCGCC CGCGACGGCT ATGTCGGCTA CCTGCCGGAG ACGGCGCTGG GGGCGATCGA TCCGGCGCCG ACCCATCGGG TCGCCGCTTT GCGCACCTTC GTTTACCCCG CGCCCGACCT GAAGCGTCCG CACCTCGCCC ATCTCAGCCT CGGCGCCGCC TTTGCGGCGG AGGCGCAGGA GGGCGAGTAC TGGCGGCTCG CCGGCGGCGG CTACGTCTTT GCCGGCCACG CCGTGCCGCT CGGGACCGCC GAGCCCGATT TTCCGGCCAC CGCCGAGCGG CTCGTCGGCA CGCCCTATCT CTGGGGCGGG CGTACCAGTC TCGGCCTCGA TTGCTCGGGC CTCGTCCAGC TCTGCCTGGA AACCGCGGGA CGGGCCTGTC CGCGCGACGC CGACCAGCAG GAACGGGGCC TCGGAACCGC CCTGCCGCCG GGGCTCGACG GCCTGCGGCG CGGCGACCTC GTGTTCTGGA AGGGCCATGT CGGGATGATG CTCGACGCCG ACCGGCTGAT CCACGCCAAC GGCCACCACA TGGCGGTGGC AGTCGAGCCT TTGCGCGAGG CGGTCGAGCG CATCGCCGTC AAGAGTTTCG GCGCCGTCAC CGCGATCCGC CGGCTCGATC CGATCGCCTG A
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Protein sequence | MPDTRDPRLT PARPDLADIR LRGVVTAERY VAGEPARVAV PSAPLRRAPR LEAGLETEAV MGDAVTVFEI RDGFAWGQIA RDGYVGYLPE TALGAIDPAP THRVAALRTF VYPAPDLKRP HLAHLSLGAA FAAEAQEGEY WRLAGGGYVF AGHAVPLGTA EPDFPATAER LVGTPYLWGG RTSLGLDCSG LVQLCLETAG RACPRDADQQ ERGLGTALPP GLDGLRRGDL VFWKGHVGMM LDADRLIHAN GHHMAVAVEP LREAVERIAV KSFGAVTAIR RLDPIA
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