Gene Mext_0858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0858 
Symbol 
ID5831275 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp936073 
End bp936933 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content74% 
IMG OID641366640 
ProductNLP/P60 protein 
Protein accessionYP_001638334 
Protein GI163850291 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0257977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.028426 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGACA CACGCGATCC CCGCCTCACC CCGGCCCGGC CCGACCTTGC CGACATCCGC 
CTGAGGGGCG TCGTCACGGC CGAGCGCTAC GTCGCGGGCG AGCCGGCGCG GGTCGCCGTG
CCCTCCGCTC CCCTCCGCCG CGCGCCGCGC CTCGAGGCCG GGCTCGAGAC CGAGGCGGTG
ATGGGCGACG CCGTGACGGT GTTCGAGATC CGGGACGGAT TCGCCTGGGG CCAGATCGCC
CGCGACGGCT ATGTCGGCTA CCTGCCGGAG ACGGCGCTGG GGGCGATCGA TCCGGCGCCG
ACCCATCGGG TCGCCGCTTT GCGCACCTTC GTTTACCCCG CGCCCGACCT GAAGCGTCCG
CACCTCGCCC ATCTCAGCCT CGGCGCCGCC TTTGCGGCGG AGGCGCAGGA GGGCGAGTAC
TGGCGGCTCG CCGGCGGCGG CTACGTCTTT GCCGGCCACG CCGTGCCGCT CGGGACCGCC
GAGCCCGATT TTCCGGCCAC CGCCGAGCGG CTCGTCGGCA CGCCCTATCT CTGGGGCGGG
CGTACCAGTC TCGGCCTCGA TTGCTCGGGC CTCGTCCAGC TCTGCCTGGA AACCGCGGGA
CGGGCCTGTC CGCGCGACGC CGACCAGCAG GAACGGGGCC TCGGAACCGC CCTGCCGCCG
GGGCTCGACG GCCTGCGGCG CGGCGACCTC GTGTTCTGGA AGGGCCATGT CGGGATGATG
CTCGACGCCG ACCGGCTGAT CCACGCCAAC GGCCACCACA TGGCGGTGGC AGTCGAGCCT
TTGCGCGAGG CGGTCGAGCG CATCGCCGTC AAGAGTTTCG GCGCCGTCAC CGCGATCCGC
CGGCTCGATC CGATCGCCTG A
 
Protein sequence
MPDTRDPRLT PARPDLADIR LRGVVTAERY VAGEPARVAV PSAPLRRAPR LEAGLETEAV 
MGDAVTVFEI RDGFAWGQIA RDGYVGYLPE TALGAIDPAP THRVAALRTF VYPAPDLKRP
HLAHLSLGAA FAAEAQEGEY WRLAGGGYVF AGHAVPLGTA EPDFPATAER LVGTPYLWGG
RTSLGLDCSG LVQLCLETAG RACPRDADQQ ERGLGTALPP GLDGLRRGDL VFWKGHVGMM
LDADRLIHAN GHHMAVAVEP LREAVERIAV KSFGAVTAIR RLDPIA