| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0849 |
|---|
| Symbol | |
|---|
| ID | 5831709 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 926043 |
|---|
| End bp | 926576 |
|---|
| Gene Length | 534 bp |
|---|
| Protein Length | 177 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641366631 |
|---|
| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
|---|
| Protein accession | YP_001638325 |
|---|
| Protein GI | 163850282 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
|---|
| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.72188 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.350978 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCTTCG AGGAACTCGC GCTGCCCGGC CTGTTCCGCG TCGTGCCCGA GCCGCACGCG
GACGAGCGCG GCTTCTTCGC CCGCACCCAG TGCGAGAGCG AATTCGCGGA GCGTGGGCTG
GTCGGGCACT TCACGCAGTC GAGCGTGTCG TTCAATCACC GCCGCGGCAC CGTGCGCGGG
ATGCATTTTT CGAAGTTGCC CCACGCCGAG ACGAAGCTCG TGCGCTGCAC CGCCGGCGCG
ATCCACGACG CGGTGATCGA CCTGCGGCCC GATTCGCCGA CCTATCTCCG CACCACGTCG
GTCACGCTCT CGGCCGCGAA CCGCCACGCC CTCTACATCC CGGCGGGCCT CGCCCACGGT
TTCCAGACGC TGAGCGACGA CGCCGAGATC CTCTACATGA TCGACCGGCC GTTCGTGGCC
TCTGCCGCGG ACGGCGTGCG CTGGGACGAT CCCGCCTTCG GGCTCGTGTG GCCCGAGCCG
GTGACGGTCA TCGCACCGCG CGACCTCGCC TTTCCCGATT GGGCGGGGCG GTGA
|
|---|
| Protein sequence | MIFEELALPG LFRVVPEPHA DERGFFARTQ CESEFAERGL VGHFTQSSVS FNHRRGTVRG
MHFSKLPHAE TKLVRCTAGA IHDAVIDLRP DSPTYLRTTS VTLSAANRHA LYIPAGLAHG
FQTLSDDAEI LYMIDRPFVA SAADGVRWDD PAFGLVWPEP VTVIAPRDLA FPDWAGR
|
|---|
| |