Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0791 |
Symbol | |
ID | 5831745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 848604 |
End bp | 849233 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641366571 |
Product | integrase family protein |
Protein accession | YP_001638271 |
Protein GI | 163850228 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.334688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 53 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGAAG TCGTTACCGT TCCCACCAGC ACACGTGTTC CCTGGAACCG CGGCCGTATT GTCGGCCCCA AACCGCCGCT GAAGCCGAAG CACATCTGGG CCCTGCGCAC ACGCCTACAA CTTGCCAACC GCACGCGAGA TCTCGCGCTC TTCAATCTCG CTGTCGACAG CAAGCTGCGC GGGTGTGATC TCGTCCGCCT GCGCGTGAGC GACATCCACC TGGGCGACGC CGTGCGTCTC CGAGCGACCA TCTGCCAGCG TAAGACCGGC AGGCCGGTCC CGTTCGAGAT CACCGAACTG ACGCGCGAAG CTCTCACGGC TTGGCTGGCT GCGCGCAGCT TGAAAGCCGG CGACTGGCTA TTCCCGAGCC GCAGCCGACA TGGAGATCAT CTTACGACAC GGCACTACAG TCGGCTGGTC GACCGCTGGG TCGCCTTGAT CGGTCTGGAC CCGCTGGGCT TTGGCACACA CAGCCTAAGG CGCACGAAGG TCGCGCTCGT CTATAAGCGC ACTGGCAACA TCCGAGCCTG CCAACTGCTG CTGGGTCATA CCAAGCTGGA GAGCACAGTT CGCTACCTCG GCATTGAGGT TGACGACGCC CTGATCCTGT CGGAGCAGAC CGAAATCTGA
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Protein sequence | MPEVVTVPTS TRVPWNRGRI VGPKPPLKPK HIWALRTRLQ LANRTRDLAL FNLAVDSKLR GCDLVRLRVS DIHLGDAVRL RATICQRKTG RPVPFEITEL TREALTAWLA ARSLKAGDWL FPSRSRHGDH LTTRHYSRLV DRWVALIGLD PLGFGTHSLR RTKVALVYKR TGNIRACQLL LGHTKLESTV RYLGIEVDDA LILSEQTEI
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