Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0754 |
Symbol | |
ID | 5833563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 819931 |
End bp | 820854 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641366537 |
Product | LysR substrate-binding |
Protein accession | YP_001638237 |
Protein GI | 163850194 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.625227 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGC TGCAGGCGAT GGAGGTCTTC GTTGAGGTGG TCGAGAGCGG CGGGTTCGCG CGGGCCGCCG AACGCCTGCG ACTCCACCGC CCCGCCGTAA CCAAGGCCGT CCAGCATTTG GAGGCCGAAC TCGGCGTGCA GTTGCTCCAT CGCACGACGC GGAAGCTCAG CGTCACCGCC GAGGGGGCCA TCTTCCACGA GCGCTGCCGC AACGTCCTCG CCGACGTCGC CGATACCCTC GCAACCTTCT CGCCGACGCG GCCACCAAAA GGCCCTGTCC GTGTCGACGT GCCGATCTCG CTGGCCAAGG CGGTGATCAT CCCCGCGCTG CCGGGCTTCT GCGAACGCTA CCCGGAGGTC GAGCTGACCC TCCGCTCCTC CGACCATCAG GTCGACCTTG TCGGTGAGGG CGTGGATTGC GCCGTCCGTA TCGGTACCCT TGAGGACTCT GGCCTGAGCG TGCGCCGGAT CGGCACCGTG CCGATGCTGA CCTGCGCCGC GCCGGCCTAC CTAGCTCGCC ACGGCAAGCC TACTGGGCTT GAGAACCTCG ACGGCCACCT CGCGGTCAAT TTCCTGATCA GGCACACCCG GCGGACGATG GACTGGAATT TCCTGATCGA TGGGCGGACG GTCGCCAGGA GCCTGCGCAG CGGCATCGTC GTGGACGACA CAGAGGCCAT GGTGACCGGC GCCATCGCTG GGCTGGGCCT GATCCAGGCG CCGCGGCCGT CGCTGCAGCC CCACGTCAAT GCTGGGACCC TTGTCGAGAT CCTGCCCGAC CTAGCCACGG TGCCGAAGCC GATATCGCTC CTCTCGACCG ACCGTCGCTT CGCGGTGCCG GCGGTGAAGG CGTTCGTGGA ATGGGTGCAG GGCCTCTTGA GGGACGAGGG CCGGACGGGA CTGTTATCGG AGCGGAAACG CTGA
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Protein sequence | MDLLQAMEVF VEVVESGGFA RAAERLRLHR PAVTKAVQHL EAELGVQLLH RTTRKLSVTA EGAIFHERCR NVLADVADTL ATFSPTRPPK GPVRVDVPIS LAKAVIIPAL PGFCERYPEV ELTLRSSDHQ VDLVGEGVDC AVRIGTLEDS GLSVRRIGTV PMLTCAAPAY LARHGKPTGL ENLDGHLAVN FLIRHTRRTM DWNFLIDGRT VARSLRSGIV VDDTEAMVTG AIAGLGLIQA PRPSLQPHVN AGTLVEILPD LATVPKPISL LSTDRRFAVP AVKAFVEWVQ GLLRDEGRTG LLSERKR
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