| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0708 |
|---|
| Symbol | |
|---|
| ID | 5834589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 770958 |
|---|
| End bp | 772445 |
|---|
| Gene Length | 1488 bp |
|---|
| Protein Length | 495 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641366489 |
|---|
| Product | AMP nucleosidase |
|---|
| Protein accession | YP_001638191 |
|---|
| Protein GI | 163850148 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0775] Nucleoside phosphorylase |
|---|
| TIGRFAM ID | [TIGR01717] AMP nucleosidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.188905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.140174 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTCATCG ACGAGTTGCG GCCGATGGAG GCCGTTGCCG ACGCGGAGAC GGCCGTGGAT
CGGCTCGAGG CGCTGCATGC GGGCGCGACC CAGGCGCTCC AGGCGGCCCT GGCGCGCTAC
CTCGAACACC GCATTGCCCC GGACGCGACC GAACGGCTCC AGTTCCGCTA CCCCGAGCTG
CGCCTGACCT ACCAGCCCGC GGGGCCGCTG CCGCGGCTCA ACCGGGCCAC CGCCAAGTTC
CAGGCGCCCG GCCTCTACGC CACCACGGTG ACGCAGCCCG GCTATTTCCG CGCCTATCTC
TTGGAGCAGT TGCGGCCGCT CGTGCGCGAT TACGGCGCCA GCATCGAGGT CGGCCTGTCG
GCCCAGGAGA TTCCCTATCC CTACATCGTC GAGCCCGGCA CCGATCTCGG CGGCAGCGGC
GTCAGCACCA GCGATCTCGC CACCCTGTTC CCGACGCCGC TCCTCTCGGT GGTGGGCGAT
GAGGTCGCCG ACGGTCTGTG GCTGGAGAAT GCGGGCGATC CGCGCCCGCT CGCTTTGTTC
GACGGGGTGC GCACCGATTA CTCCCTGCGC CGGCTCGTGC ATTACACCGG CTCGGACTGG
CGCGAGATCC AGCCCTGGAT CCTGCTGACC AATTATCACC GCTACGTCGA CGGCTTCGTC
CGCCACGGGC TGGAGCGTCT GGCGGCGGGG GAGGGGGAGC GGCTGGTGCT GCCCGGCGGG
ATCGTCGTGG AGCAGGCGGA GGCCGCCTCG GCCGATCCGG CAGCGCTGAT CGCCGCCTCG
CCCTGGCACA AGTACCAGAT GCCGGCCTAC CACCTCGTCG GTCGCGGGCC CGATGGGGCG
CCGCAGGGCA CGACGCTGGT CAATATCGGC GTCGGCCCCT CCAACGCGAA GACCATTACC
GACCATCTCG CGGTGCTGCG CCCGCATTGC TGGCTGATGG TCGGGCATTG CGGCGGATTG
CGGCAGTCCC AGACCATCGG CGACTACGTG CTCGCCCACG GATATCTGCG CCGCGACCGC
ATCCTCGACG ACCTCGTGCC GCCGGAGATT CCGGTGCCGG CTTTGGCCGA GGTGCAGATT
GCCCTGCAAG CGGCGGCGGC CGCCGTCACC GGCGAGCGGG CGGACGCGCT GAAGCAGCGC
CTGCGCACCG GCACGGTCGT GACCTACGAC GATCGCAACT GGGAGCTTCG CTTCAGCCAG
GAGCGGCGGC GCATCAACCT CTCGCGGGCG ATCGCGGTGG ACATGGAGAG CGGCACCATC
GCCGCGCAGG GCTATCGCTT GCGGGTGCCC TACGGCACGC TGCTCTGCGT CTCCGACAAG
CCGCTGCACG GCGAGATCAA GCTACCAGGC GCGGCCAACG CCTTCTACGA GCGGGCGGTG
GCCGAGCATC TCAAGATCGG GCTCGCCACG CTCGACACCC TGCGCGCCGA CCGGGCCGGC
CTGCATTCGC GCAAGCTCCG CAGCTTCGAC GAACCACCGT TCCGGTGA
|
|---|
| Protein sequence | MVIDELRPME AVADAETAVD RLEALHAGAT QALQAALARY LEHRIAPDAT ERLQFRYPEL
RLTYQPAGPL PRLNRATAKF QAPGLYATTV TQPGYFRAYL LEQLRPLVRD YGASIEVGLS
AQEIPYPYIV EPGTDLGGSG VSTSDLATLF PTPLLSVVGD EVADGLWLEN AGDPRPLALF
DGVRTDYSLR RLVHYTGSDW REIQPWILLT NYHRYVDGFV RHGLERLAAG EGERLVLPGG
IVVEQAEAAS ADPAALIAAS PWHKYQMPAY HLVGRGPDGA PQGTTLVNIG VGPSNAKTIT
DHLAVLRPHC WLMVGHCGGL RQSQTIGDYV LAHGYLRRDR ILDDLVPPEI PVPALAEVQI
ALQAAAAAVT GERADALKQR LRTGTVVTYD DRNWELRFSQ ERRRINLSRA IAVDMESGTI
AAQGYRLRVP YGTLLCVSDK PLHGEIKLPG AANAFYERAV AEHLKIGLAT LDTLRADRAG
LHSRKLRSFD EPPFR
|
|---|
| |