| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0629 |
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| Symbol | fliF |
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| ID | 5833989 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 689058 |
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| End bp | 690737 |
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| Gene Length | 1680 bp |
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| Protein Length | 559 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641366412 |
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| Product | flagellar MS-ring protein |
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| Protein accession | YP_001638114 |
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| Protein GI | 163850071 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1766] Flagellar biosynthesis/type III secretory pathway lipoprotein |
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| TIGRFAM ID | [TIGR00206] flagellar basal-body M-ring protein/flagellar hook-basal body protein (fliF) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.252464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGGTC GCGAGCAAGC CGAAAGATTG TGGAGCAACA TCGTCGATCT CGGCGCGAGG
CGGCTGATCG CCCTCGGGCT GGTCGGCCTC TTGGTGTTTC TCGGCGTCGG TGTCGGCGCC
TACTATCTCA GCCGTCCGGC GCAGGAGATG CTCTATACGG GCCTCTCGCG TGAGGACGTG
TCGCGCATCG GCGGCGTGCT CAAGGACAAC GGCATCCCCT TCGACGTGTC GTCCGACGGC
ACGGCGGTGC TCGTTTCCTT CGGGCACACC GCGCAGGCGC GGATGCTGCT CGCCGAGAAG
GGCCTGCCGC AGAGCTCCAA GTCCGGCTAC GAGCTGTTCA ACGATCTCGG CTCGCTCGGC
ATGACCTCGT TCATGCAGGA GGTGACCCGC GTGCGGGCGC TCGAAGGCGA GATCGCCCGC
ACCATCCAGG GCATGAAGGG CGTGCGCGCC GCCCGCGTCC ACTTGGTGCT TCCCGACCGC
GGCTCGTTCC GCCGCGACCA GCAGCCGGCC TCCGCCTCCG TGGTGGTGCG CACCGAGCCC
GCCGACGACA CGTCCGGCGC GCAGGCGATC CGCCAGCTCG TCGCCTCGGC GATCCCCGGC
ATGAAGCCCG ACCGCGTCAC CGTGATCGGC TCGGAGGGCA CGGTGCTGCT CGCGGGCGAC
GATGCCGGCA CGGCGCCAAC CGGCAAGATG GCGACGCTGG AAAAGTCGGT GAGCCGCGAG
ATGCAGGACA ACATCCGCCG CACGCTCGCG CCCTATCTCG GCGTCGGCAA TTTCGAGATC
AGCGTCGCGA CCCAGCTCAA CACCGACAAG ACGAGCACGA ACGAGACGAT CTTCAACCCC
GACCAGCGGG TGGAGCGCTC GGTGCGCTCG GTGCGCGAGA GCGAGAACGC GCAGAACCGC
AACAGCCAGC GCCCGACCAG CGCCCAGGAG AACCTGCCCG ACCAGCGCAC CCGCTCGGAC
GGCAACGACC AGTCGAGCAA CGAAAGCTCG AAGAAGGAAG ACCTCACCAA TTACGAGATC
TCCCAGAAGA CGGTCCAGAC GGTGAGCGAC GGCTACGCCA TCCGCCGCCT CTCGGTCGCG
GTGCTGGTCA ACCGCTCGCG GTTGACCGCG CTCGCCGGGC CCGACGACAA AGCCAGCCTC
GACAAGCAGA TTGCCGAGAT CGAGGAACTG GTGGGCTCGG CCGCGGGCTT CAGCAAGGAG
CGCGGCGATA CGATCAAGGT CGCGGCGGTC GGCTTCGTCA ACGACGGACA GCCGATGGAG
CCGGTGCCGC CGCTCTCGCT CACCGACGTG ATGATGAAGC AGTCCGGCAC GCTCATCAAC
GCGGCGACGA TCCTCGTCGT GGCGGGCCTG CTGATCTGGT TCGGCCTGCG CCCGGCCCTG
CGCGCGATCC TGGCGACACC CGAGACCGCC CAGAGCGAGG TCGCGGCACT CGCCGGCCCC
GAGGGCGCAC CCGCGCTCGC CGCCGACGGC ACGATGGCGC TGGCCGCACC GGGTGCCGCG
CTTCCCGGCT CCGGCGAGGC GGCCAAGCTC CCCGCGCCTG GCATCGCCGG CCTGCTGGAG
GAACTGGAGG ACAAGATGGC CCGCTCGCCG CAGAAGCGGC TGGAGCAGCT CATCGACATC
GACGAGGAGC AGGTCGCGGC CGTGCTCAAG CGCTGGCTCA TGCGTGAGGA GGCGGCGTGA
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| Protein sequence | MFGREQAERL WSNIVDLGAR RLIALGLVGL LVFLGVGVGA YYLSRPAQEM LYTGLSREDV
SRIGGVLKDN GIPFDVSSDG TAVLVSFGHT AQARMLLAEK GLPQSSKSGY ELFNDLGSLG
MTSFMQEVTR VRALEGEIAR TIQGMKGVRA ARVHLVLPDR GSFRRDQQPA SASVVVRTEP
ADDTSGAQAI RQLVASAIPG MKPDRVTVIG SEGTVLLAGD DAGTAPTGKM ATLEKSVSRE
MQDNIRRTLA PYLGVGNFEI SVATQLNTDK TSTNETIFNP DQRVERSVRS VRESENAQNR
NSQRPTSAQE NLPDQRTRSD GNDQSSNESS KKEDLTNYEI SQKTVQTVSD GYAIRRLSVA
VLVNRSRLTA LAGPDDKASL DKQIAEIEEL VGSAAGFSKE RGDTIKVAAV GFVNDGQPME
PVPPLSLTDV MMKQSGTLIN AATILVVAGL LIWFGLRPAL RAILATPETA QSEVAALAGP
EGAPALAADG TMALAAPGAA LPGSGEAAKL PAPGIAGLLE ELEDKMARSP QKRLEQLIDI
DEEQVAAVLK RWLMREEAA
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