| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0625 |
|---|
| Symbol | |
|---|
| ID | 5835014 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 686501 |
|---|
| End bp | 687208 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641366408 |
|---|
| Product | flagellar L-ring protein |
|---|
| Protein accession | YP_001638110 |
|---|
| Protein GI | 163850067 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG2063] Flagellar basal body L-ring protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 0.317328 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCCT CCTCCGCCGC CGTGGCCGTG CTGGCCCTCT CGCTCGGCGC CTGCCAGAGC
GATCTCGACC GCCTCGGCCG CCCGCCGCTG CTGACGCCGA TCGGCACCGG GCTCAACGCG
CCGCGTGAGC CGCTGCCGAC CTCGTTCGGC GCGCTCGGCC CGCGCCACAG CTACCACTCG
ACCTGGAGCC CGGCGAGCGC CGCGCTCTAC CAGGATCCGC GCGCCCGCGA CGTCGGCGAC
GTCATCACGG TCAGCATCGC CATCAATGAT AAGGCGCAGT TCGACAACGC GAGCGAGCGC
GGCCGCAGCC AGAAGAGCAG CCTCGGCTTC GATTTCGGCT ACGGCATCTC GGGGCTCAAG
GACACGGCCA CCGCCGATAC CGGCATCCGC TCCGGCACCG AGACCAAGGG CCAGGGCTCG
ATCGACCGCA AGGAATCGCT CAGCCTCTCG GTCGCGGCAG TGGTCACCGA GGTGCTGCCC
AACGGCAACG TGCTGATCTC GGGCTCGCAG GAAGTGCGGG TCAACAACGA GGTCCGCGTG
CTCGAAGTCG CCGGCATCGT CCGCCCGCGG GACATCTCGC GCAAGAACAC CATCGATTAC
GACAAGATCG CCGAGGCGCG CATCTCCTAC GGCGGGCGCG GCCGCATCAC CGACGTACAG
GGCCCAAGCC TGGGCCAGCG AGTCTTCGAG ACCGTCGCAC CGTTCTGA
|
|---|
| Protein sequence | MRPSSAAVAV LALSLGACQS DLDRLGRPPL LTPIGTGLNA PREPLPTSFG ALGPRHSYHS
TWSPASAALY QDPRARDVGD VITVSIAIND KAQFDNASER GRSQKSSLGF DFGYGISGLK
DTATADTGIR SGTETKGQGS IDRKESLSLS VAAVVTEVLP NGNVLISGSQ EVRVNNEVRV
LEVAGIVRPR DISRKNTIDY DKIAEARISY GGRGRITDVQ GPSLGQRVFE TVAPF
|
|---|
| |