| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0588 |
|---|
| Symbol | |
|---|
| ID | 5835812 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 649115 |
|---|
| End bp | 650770 |
|---|
| Gene Length | 1656 bp |
|---|
| Protein Length | 551 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641366371 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_001638073 |
|---|
| Protein GI | 163850030 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1216] Predicted glycosyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.231059 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.109318 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCCG ACGGCTTGCC CCCCGCATGG CCCGACGCCC TGCTCTTCGC CGCCGAGCCC
GTTCCGGGAC GCCTCGCGCT GCTCGCCCGG GCGCTCCGCC AGCCGAAGCG GACGCTGCCG
ATCCTGTCGG CGCGGCTCTC CGGCCGGCGA TTGCGGGCGG CGCAGGCTTT CGTCGCGCTG
GTCGGCGCCC ATCATCATTT GGACCGCCCC CGCATCGTCC CACCGCCGAG CGAACCGCAA
GCCGCCCTCG CGGCAGCCGG GATCGAGCGC GTTGTGACGG ATGCGACGGG CGCGATTCGC
ATCACCGCGG ACGGGCCTCC GATTGTCCTG CTCACGTCCG AAGGCCAGCA CATTGCGGCC
GGCGCGGGCG CGGCCATCGC CGCCGCCTTC GCCGATCCGG ATCGCCACGC AATTTACGGC
GACGCATTGT TCCGCCACGT CGCCCACGGC TCCTGGCTTC CCCTGCTGCG GCCGGCCTTC
GATCGGGACT ACCTGCGCAC GGTCGATTAT CTCGGCCCCG TCATCGCCCT TCGCCGTGCC
AGCGTGATCG GAATCGACAC CGTTCCCGGC GCCATCGCGC TCGACCTGGC CCTGGCAATC
GCGCACCGTT TCGGTCCGGG CGCCGTGCGC CATCTTCCAC GCGTCTTGTC CTTCGGCCGA
TTCGACGAGA CAGGGGAGGG GCGAGCGGCA CGGCGGGAGG CGGTTCGGCG CGATCTCGAT
CGGGTGGGGG AGGGGGGCAC GCCCGTCCTG GTCGGGCAAG ACGGCGTGAT CCGCCTCGAC
CGGCCTTTGC CGGAGCCGCG CCCCCTCGTC AGCCTGATCG TCCCGACTCG CGACCGGCTC
GACCTGCTTC GGCCCTGTAT CGAGAGCCTG CGTCACCGCA CCGACTGGCC GGCCAAGGAG
ATCCTGATCT GCGACAACGA CAGTCGCGAT CCCGAGACGC TCGCCTATTT CCGCACTCTC
GAGGCAGAGG GCGCGGCGCG GGTCGTCGCC TGTCCGGGTC CCTTCGACTT CGCCGCGATC
AACAACCGCG TGGCGGCGCA GGCGCGTGGA CGCCTCCTCG CCTTCATCAA CAACGACGTC
GAGGCCGAAG CGCCGGACTG GCTGGAGCGC ATGGTCCGCG AGGCCTTGCG CCCGGAGATC
GGCGCGGTCG GGGCCCGGTT GGTCGATGGG GAGGGCCGGA TCCAGCATGG CGGGATCGTG
CTCGGCACCG GTGGTCTCGT CACCCACGGC CACCGCTATT TCGCCGGGGA TGCGGCGGGC
TATCTCGGCG CGTTGCACGC CACCCGAAGC GTCTCGGCCG TGACCGCCGC CTGCCTCGTC
ATCGAGGCGG ACAAGTTCTC TCGCGTCGGT GGCTTCGATG CATCGACCTT CGCCATCGAT
TTCAACGACG TCGATCTCTG CCTACGGCTG AACACGATCG GCCTGCGGAC CCTCTATGTC
GGCGGCGCCC GGCTCCATCA CCGGGAATCG GCGAGCCGCC GGCCGTCACC GGCGGCCGCC
GCCCGACACC GTGCCGAGGT CGAGGCGCTG AAAAAGCGAT GGGGGCCGCT GCTCGCGCAG
GACCCCCATT ATCATCCGGG CTTCGACCCG GACCTCTCGA CTCATCTCCG CCTTCGCCGA
GGCTGGACCG GCCTGGAGCC GGCCGAGCCT CGCTGA
|
|---|
| Protein sequence | MSADGLPPAW PDALLFAAEP VPGRLALLAR ALRQPKRTLP ILSARLSGRR LRAAQAFVAL
VGAHHHLDRP RIVPPPSEPQ AALAAAGIER VVTDATGAIR ITADGPPIVL LTSEGQHIAA
GAGAAIAAAF ADPDRHAIYG DALFRHVAHG SWLPLLRPAF DRDYLRTVDY LGPVIALRRA
SVIGIDTVPG AIALDLALAI AHRFGPGAVR HLPRVLSFGR FDETGEGRAA RREAVRRDLD
RVGEGGTPVL VGQDGVIRLD RPLPEPRPLV SLIVPTRDRL DLLRPCIESL RHRTDWPAKE
ILICDNDSRD PETLAYFRTL EAEGAARVVA CPGPFDFAAI NNRVAAQARG RLLAFINNDV
EAEAPDWLER MVREALRPEI GAVGARLVDG EGRIQHGGIV LGTGGLVTHG HRYFAGDAAG
YLGALHATRS VSAVTAACLV IEADKFSRVG GFDASTFAID FNDVDLCLRL NTIGLRTLYV
GGARLHHRES ASRRPSPAAA ARHRAEVEAL KKRWGPLLAQ DPHYHPGFDP DLSTHLRLRR
GWTGLEPAEP R
|
|---|
| |