Gene Mext_0559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0559 
Symbol 
ID5832098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp608075 
End bp609337 
Gene Length1263 bp 
Protein Length420 aa 
Translation table11 
GC content68% 
IMG OID641366336 
Product3-oxoacyl-(acyl-carrier-protein) synthase 2 
Protein accessionYP_001638045 
Protein GI163850002 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase 
TIGRFAM ID[TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.619315 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGCGGG TGGTGATCAC GGGACTAGGG ATGGTTTCGC CGCTGGGTGG CAGCGTCGAG 
CATACCTGGA GCCGCCTCAT CGCCGGTGAC AGCGGAGCCT CCGCGGTCAC CGCGTTCCAG
ACCGACGACC TCGCGTGCCG GATCGCCTGC ACGCTGCCCT TCGGCGACGG CTCCAACGGC
ACCTTCAATC CCGATCTGTG GATGGAGGCC AAGGAGCAGC GCAAGGTCGA TCCTTTCATC
GTCTATGCCA TGGCCGCTGC CGGCCAAGCG CTCGACGATG CCGACTGGCA TCCGAAATCC
GACGCGGATC AGGAGGCCAG TGGCGTCCTG ATCGGTTCGG GCATCGGCGG CATCGGCACG
ATCTACGACG CCTCCGTGAC CCTCCACGAG AAGGGTCCGC GGCGCATTTC GCCCTTCTTC
ATTCCCGGCC GAATCATCAA CCTCGCCTCG GGGCAGGTCT CGATTCAGCA CGGGCTGAAG
GGCCCGAATC ACGCGGTCGT CACCGCCTGC TCCACTGGCG CGCACGCCAT CGGCGACGCC
TCGCGGCTGA TCGCGCTGGG CGACGCCGAC GTGATGGTGG CCGGCGGCAC CGAGGCGCCG
GTCAACCGGC TGTCGCTGGC GGGCTTCGCC GCCTGCCGCG CGCTCTCGAC CGGTTTCAAC
GACCAGCCGA CCAAGGCCTC CCGGCCCTAC GACCGCGACC GCGACGGCTT CGTCATGGGC
GAAGGCGCGG GCATCGTCGT GCTCGAAGAG TACGAGCACG CCAAGGCGCG CGGCGCCAAG
ATCTATGCCG AGGTTATCGG CTACGGCCTG TCGGGCGACG CCTACCACAT CACCTCGCCG
GCCCCGGACG GCGACGGCGG CTACCGCTGC ATGAAGGCGG CGGTGAAGCG GGCCGGGATC
GACCCGTCCG AGATCGACTA CATCAACGCC CATGGCACCT CGACGCCGCT CGGCGACGAG
CTGGAGCTGA AGGCCGTCGA GCGTCTGCTC GGTGATGCCG CGTCCAAGGC GTCGATGTCA
TCAACGAAGT CGGCCATCGG CCACCTGCTC GGCGCAGCCG GGGCGGTGGA GGCAATCTTC
TCCGTGCTCG CCATCCGCGA TGGCGTGATG CCGCCGACGC TGAACCTGGA CAATCCGTCG
GTCGAGACCG CGATCGACCT CATCCCGCAT GAGGCCAAGC GCAAGCGCGT CGACACGGTT
CTCTCGAACT CGTTCGGCTT CGGCGGCACC AATGCCTCGC TGCTGATGCG CCGGGTCGCC
TGA
 
Protein sequence
MRRVVITGLG MVSPLGGSVE HTWSRLIAGD SGASAVTAFQ TDDLACRIAC TLPFGDGSNG 
TFNPDLWMEA KEQRKVDPFI VYAMAAAGQA LDDADWHPKS DADQEASGVL IGSGIGGIGT
IYDASVTLHE KGPRRISPFF IPGRIINLAS GQVSIQHGLK GPNHAVVTAC STGAHAIGDA
SRLIALGDAD VMVAGGTEAP VNRLSLAGFA ACRALSTGFN DQPTKASRPY DRDRDGFVMG
EGAGIVVLEE YEHAKARGAK IYAEVIGYGL SGDAYHITSP APDGDGGYRC MKAAVKRAGI
DPSEIDYINA HGTSTPLGDE LELKAVERLL GDAASKASMS STKSAIGHLL GAAGAVEAIF
SVLAIRDGVM PPTLNLDNPS VETAIDLIPH EAKRKRVDTV LSNSFGFGGT NASLLMRRVA