| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0495 |
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| Symbol | |
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| ID | 5832492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 537817 |
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| End bp | 539541 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641366273 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001637982 |
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| Protein GI | 163849939 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.355875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 50 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCCGGC TTACCAACAA AGTTCCTCTC AGACGTCAAA TCAGCCTGTT GGCTGGAGCC
ATCGGCCTGA TAGTCGTGGG CGTGACGACA GTCGGATCCG CCCTGCTGGC GCGCGGCCAG
GCTGCCGACA TGGCTCAGGA CGCCCTTCGG CAGGTCGCCC GGTCCATGGC GGACCGCCTC
GACCAAGACA TGGCCGAGCG CCTGCGCGAG ATCCGCAACG TCGCAAGCCT CGAACCCCTC
CGGCCCCACT GGCTGGAGAA TACGGGCAAC CTGCGCACCG TGCTCGACGC GATGCAGAGG
ACGCTGCCGG ACTACGCCTG GATCGGGTTC GCCGATCAAG ATGGCCGGGT ACGCGCCGCT
ACTGGCGGCA TCCTCGAAGG GGCGAGCGTC GGCCAGCGCC CCTGGTTCCT CAATGGCATC
CGGCAAGCCG CCGTCGAGGA CGTTCACGCC GCGAACCTTC TGCAGTCCTT GCTTAAGCCG
CACGCCGATG GAACGCCGTT CCGCTTCGTC GACGTGGCTG CCCCGGTCAG CGACAGCTCG
GGCCGGATCG TCGGCGCGCT CGGAGCCCAT CTCAGCTGGC GCTGGGCCGA TGTGGTTCGG
CGCGAGGTGC TGTCGTCCCG TCGGCCCGAG CTGAAGGAGG ACATCATTGT CCTCGATCGG
TCCGGCCGGG TTTTGCTCGG GCCAGACCTT GCGGAGGCCC CTTTCACGGC AGCGGAACTC
GTTGCTGGAC ACTTCATCGA TCACCGCACG GGAGGCGATC GGCTCGCTGC GGCGGCCTCC
ACCCGCGGCC GGGGCGATTA CGCGGGCCTA GGCTGGATCG TCGTCGCCCT GCAGCCCGTC
GATACGGCGC TCGCGGGCGC CAATCGCCTG ACCAGCCTGA TCCTGTTCGT CGGCCTCGGC
GCCGCTGTGC TTGGCATGAT CGGAATCGGG ATTATCGCCG GGCGGCTGAG CCGACCCCTG
ACGCGGCTGA CGGAGGCGGT CGACCGCATC GGACGGCAGC CGAACGCGCG GATGACGGAC
CGCGTGCACG GCTCTCCCGA GGTTCTGCGC CTGTCCACCG CGATCCGGTC GCTCCTCAGA
CGTATCGGCA CGGCTGAGGA GGATGCGCGG CTGAGCCGGG CCGAGGCTAC GGACAAGGTC
CACGCCGCGG AGGACCGTGT CCGACGTCTC GGCGCCGATC TCCACGCCAT GCAGGTCCTG
GCCGACACGG ACGCTCTCAC GGGTCTGCTC AACCGGCGGG CGTTCCTGCC CCTGGCCAAC
GATGCGATGA GCTACTTTAT GCGCTACCGG CGCAGCATCT GCGTCCTGAT GATCGACATC
GATCACTTCA AGCGCGTCAA TGACCTGTAC GGCCACGCGG CGGGCGACGA GGTCATCCGC
CAGGTTGGCC GGATCATCAG AGACGCAATT CGGGCCACCG ACAAGGTGGC GCGGTTCGGC
GGCGAGGAAT TCGTGGTCCT TCTCCGGGAG ACCGATCTGC AGGGCGCGGT GATCTTCGCC
GAGCGCATTC GCCAGACAGT CGCCGGCACC GTGTTCGAAC CGGAGGGACA GTGCCTCAGA
GCGACGATCA GCATAGGCAT GGCCGGCGCT GAGGTCACGG ATGACGACAT CGACCACACG
ATCGAGCGCG CGGACCGCGC CCTCTACGCG GCGAAGTCCG GCGGGCGCAA CTGTGTGCGC
ACGTTCGAGG ACAGGCCGTC ACGCGACCTG CGGGCAGCGG CCTAG
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| Protein sequence | MLRLTNKVPL RRQISLLAGA IGLIVVGVTT VGSALLARGQ AADMAQDALR QVARSMADRL
DQDMAERLRE IRNVASLEPL RPHWLENTGN LRTVLDAMQR TLPDYAWIGF ADQDGRVRAA
TGGILEGASV GQRPWFLNGI RQAAVEDVHA ANLLQSLLKP HADGTPFRFV DVAAPVSDSS
GRIVGALGAH LSWRWADVVR REVLSSRRPE LKEDIIVLDR SGRVLLGPDL AEAPFTAAEL
VAGHFIDHRT GGDRLAAAAS TRGRGDYAGL GWIVVALQPV DTALAGANRL TSLILFVGLG
AAVLGMIGIG IIAGRLSRPL TRLTEAVDRI GRQPNARMTD RVHGSPEVLR LSTAIRSLLR
RIGTAEEDAR LSRAEATDKV HAAEDRVRRL GADLHAMQVL ADTDALTGLL NRRAFLPLAN
DAMSYFMRYR RSICVLMIDI DHFKRVNDLY GHAAGDEVIR QVGRIIRDAI RATDKVARFG
GEEFVVLLRE TDLQGAVIFA ERIRQTVAGT VFEPEGQCLR ATISIGMAGA EVTDDDIDHT
IERADRALYA AKSGGRNCVR TFEDRPSRDL RAAA
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