| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0437 |
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| Symbol | |
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| ID | 5830986 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 482738 |
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| End bp | 486415 |
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| Gene Length | 3678 bp |
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| Protein Length | 1225 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641366221 |
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| Product | PAS sensor protein |
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| Protein accession | YP_001637930 |
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| Protein GI | 163849887 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase
[COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.719852 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.440419 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGGAA TGCGCAACGG CGAGGGCGTG CCGGCGTCCC TGCGCTTCCT TGAGGAGGGC
GGGCAGACGG GCCGGGAGAT CCTGGCGTAT CCCTGGTCGG ACACACCGCT CGGCCCACTG
GAGGATTGGC CGGTCTCCCT CCGCACGACG TTGGCGACGA TGCTGGCCTG CCCGGCCGCG
ATGTTCCTCG CCTGGGGACC TGAGGGGATT TCCTTCTTCA ACGATGCCTA CCGGCCGGTC
TTCGGCGACC GCTTGCCCCG GGCCCTCGGT GCGCGCTTTC GCGAGATCTG GGCCGACCTG
TGGGAGGATA TCGGCCCGCT GGTCGATGCC GCTCTGCGCG GCGAAAGCGT GGCCCAGCGC
AACCTGCCGC TCCTCATGGA CCGCTACGGG GTGCCCGAGG AGAGCTGGTG GAGCTTCACC
TATTCGCCGG TGCGCGACGA TGCGGGCCGC ATCAACGGCA TGATCTGCGT CACGGCGGAG
ACGACCGCCG AGGTGCTGGC CGAGCGCGCG CGCCGTCGCA GCGACGAGCG CCTTGAAATG
GCGCTCTCGG CCGGAGGCAG CATCGGCATC TGGGATTGGG ACGTCGCGGC CGATCGCGTC
ACCGCCGATC CGCGCTTTGC TGCGCTCTAT GGCGTCGATC CGGAGATGGC GGCGGCCGGG
GCGCCCATCG CCGCATTCTT TTCCGGGGTG CACCCCGACG ACCTGCCAAG CCTGAAAGCG
AGCATCGGGG CGGTCTTCGG CACGGGCGGG CAGTTCGATG CGGAGTACCG CCTCGTTCAG
GGCGATGGCA GCATCCGCTG GGTCGCCGCG CAGGGTCGCT GCACCCTCGG CGAGGATGGG
ACGCCGCGCC ACTTCCCAGG CGTCAGCTTC GACATCACCG AGCGCAAGCG CATCGAGCAG
GCGCTCCGCG ACAGCCAGGA CCGCTTCCGC GGCATCATCA ACTCGGTCGA TCAGATGATC
TGGTCGACGC GGCCCGACGG CTACCACGAC TTCTATAACG AGCGCTGGTA CGCGTTCACC
GGCGTCCCCG CCGGCACGAC CGACGGCGAG GCCTGGAACG GCATGTTCCA TCCCGATGAC
CGCGAGCGGG CCTGGGCGGC ATGGCAGCAC GCCCTCGCCA CGGGTGAAAA CTACCAGATC
GAGTACCGCC TGCGGCACCG CTCCGGCCTC TACCGCTGGG TGCTCGGCCG GGCACAGCCG
GTGCGCGATC CGGATGGGCG GATCGTGCGC TGGTTCGGCA CCTGCACCGA TATCCACGAC
CGCAAGCTTG CCGAAGAACG CCAAGCCTTC CTGCTCGGCC TCAACGACCG GCTGCGGGAG
GCGGACGAGC CGCAGGCGGT GACGCTGGCC GCGGCCGCGA CGCTCGGCGC CCATATCGGC
GTGGCGCGGG CCGGCTACGG CGAGATCGAC GAGACCGGCG AGATCGTGCG GGTCGAGCGC
GACTGGACCC GCGACCCGTC GGTGCCGAGC CTCGCGGGCG CGTCGCGCAT CCTCGACGGG
TTCGGCCCGG CGGTGATCGC GGAACTGCGG GCCGGGCTCA CCCTCGTGGT GGACGATTGC
TACGCCGACC CGCGGGCCGG GCACGATTAC GCGGCGACGT GGGATTCGAT CGGCTGCCGG
TCGCTCGTCG TCGTCCCGCT GATCCGCGAG GGGCGGTTGC GGGCGATCCT CTACCTGCAT
GAGCCGAAGC CGCGGGTCTG GAGCGCCGAG GAGATCGGGT TGGTCGAGGA TGTCGCCCAG
CGCGTCGGCC ATGCCGCCGA GCGCGCCCGC GCGGAGCAGG CCGAGCGCGC CAACGCCCGC
GAACTGCGCC TGATCGCCGA TTCGCTGCCG GTCCTGATCG CCCTGTTCGA TGCGGACGGC
GTATGCCGCT TTGCCAATGC CGCCAGCGCC GACTGGTTCG GCGTCGCCCC GGCGGAGTCG
GTGGGGCAGA CGCTCGCCGC GCTGATCGGG CCGGCGGATT TCGCCGAGGC GCGGCCACGC
TTCGAGAGCG CCCGCGCCGG CCGCGACGTG CGCGCCGGGC GGGCCTGGCC GCGCCGGGAC
GGCAGCCCGC GTATCGCCGA CATCCGCTAC CTGCCACGAC CGATGCCGGA CGGCTCGACC
GACGGGGCCT ACCTGTTCGT CACCGACATC TCGGATGCCA AGCGCATCGA GGCGATGCTG
GAGCGTGAGG TCGGCGAGCG CACGCGCGAG CGCGACCGCC TCTGGCAGAC CACCAACGAC
CTGATGGGGA CGGCCGGCCT CGACGGCCAT CTCCGCAGCG TCAATCCGGC CTGGGGGCGC
CTGCTCGGCT GGAGCGAGCA GGAACTGCTC GAACGCCCGT TCCTCGATTT CATCGACCCC
GAGGACCGTG CCGGCACCGG TGCCGTGCTG GCACGGCTCG CCGGGAGCGA CCAGATCACC
GATTTCGTCG ATCGCATCCT CAGCAAGGAC GGACGCCGCC GCACGGTGAT GTGGACGGCG
GTGCCCGAGA GCGGCTGCTT CCATATCGTC GGCCGCGACA TCACCGACCA GCGGCTTGCC
GAGGAGCAAT TGCGGCAGGC GCAGAAGATG GAGGCTGTCG GCCAGTTGAC CGGCGGCATC
GCCCACGACT TCAACAACCT CCTGACGGGC ATCATCGGTT CGCTCGACCT GATGCAGACC
CGCATCGCCC AGGGCCGCAT CGACACCCTG GAGCGCTATG CCGGGGCGGC CCTCACCTCG
GCGCACCGGG CCGCGTCGCT GACCCATCGC CTGCTCGCCT TCGCCCGGCG CCAGCCGCTC
GAACAGAAGC CCGTCGATGT GAATGTGCTG CTGGCCGGCA TGGAGGAGAT GCTGCGGCGC
GCGCTCCCCG AGCAGGTCCA TCTCGATATC GTCGCGACGG AGGGCGTCTG GCCCACCCTC
TGCGATCCGC ACCAGCTCGA GAACGCGGTG CTCAACCTCG CCATCAATGC GCGCGACGCC
ATGCCGGAGG GTGGCCGGCT CGTGGTCGAG ACCAGCAATG CCCATATCGG GCCCGCCGAT
CTCAGCCTGC ATTCGGGCGC CCGCGAAGGT GCCTATGTCT GCATCCGCGT CACCGATACG
GGCCATGGCA TGCCGCCGGA GGTCGCGGCC CGGGCCTTCG AGCCGTTCTT CACGACCAAG
CCCCTCGGCA TGGGGACCGG TCTCGGCCTG TCGATGATCT ACGGTTTCGC CCGTCAGTCG
GAGGGACATG CCCGGATCGT ATCCGAGCCC GGCCGGGGGA CGACGGTGAC GATCTGCCTG
CCCCGCTACC GTGGTGCGCT GTCGTCCGAG CGTGCGTCGG TGTCGCTGCC CGAGCCGGCG
CGTTTCGAGC GGAACGAGAC GGTCCTCGTG GTCGAGGACG AGTTGGTGGT GCGCGACCTC
GTCGTGGAAG TGCTGCGCGA GCTCGGCTAC CGCGCGATCG AGGCACCGGA CGGGCCGTCC
GGCCTCGAGA TCGTGCGATC CTCCGCCCGG ATCGATCTAC TGGTCACCGA TGTCGGCCTG
CCCGGCCTCA ACGGGCGCCA ACTCGCAGAC CACGCCCGCA CCCTGCGGCC CGAACTGAGG
GTGCTGTTCA TGACGGGGTA CGCCGAGAAC GCGACGTTCG GCGGGGGACC GCTCGATCCG
GACATGCAGA TGATCACCAA GCCGTTTCCG GTCGAACGGC TCGCCGCGCG CATCCGCGAG
ATGATGGAGC TTTCGTGA
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| Protein sequence | MTGMRNGEGV PASLRFLEEG GQTGREILAY PWSDTPLGPL EDWPVSLRTT LATMLACPAA
MFLAWGPEGI SFFNDAYRPV FGDRLPRALG ARFREIWADL WEDIGPLVDA ALRGESVAQR
NLPLLMDRYG VPEESWWSFT YSPVRDDAGR INGMICVTAE TTAEVLAERA RRRSDERLEM
ALSAGGSIGI WDWDVAADRV TADPRFAALY GVDPEMAAAG APIAAFFSGV HPDDLPSLKA
SIGAVFGTGG QFDAEYRLVQ GDGSIRWVAA QGRCTLGEDG TPRHFPGVSF DITERKRIEQ
ALRDSQDRFR GIINSVDQMI WSTRPDGYHD FYNERWYAFT GVPAGTTDGE AWNGMFHPDD
RERAWAAWQH ALATGENYQI EYRLRHRSGL YRWVLGRAQP VRDPDGRIVR WFGTCTDIHD
RKLAEERQAF LLGLNDRLRE ADEPQAVTLA AAATLGAHIG VARAGYGEID ETGEIVRVER
DWTRDPSVPS LAGASRILDG FGPAVIAELR AGLTLVVDDC YADPRAGHDY AATWDSIGCR
SLVVVPLIRE GRLRAILYLH EPKPRVWSAE EIGLVEDVAQ RVGHAAERAR AEQAERANAR
ELRLIADSLP VLIALFDADG VCRFANAASA DWFGVAPAES VGQTLAALIG PADFAEARPR
FESARAGRDV RAGRAWPRRD GSPRIADIRY LPRPMPDGST DGAYLFVTDI SDAKRIEAML
EREVGERTRE RDRLWQTTND LMGTAGLDGH LRSVNPAWGR LLGWSEQELL ERPFLDFIDP
EDRAGTGAVL ARLAGSDQIT DFVDRILSKD GRRRTVMWTA VPESGCFHIV GRDITDQRLA
EEQLRQAQKM EAVGQLTGGI AHDFNNLLTG IIGSLDLMQT RIAQGRIDTL ERYAGAALTS
AHRAASLTHR LLAFARRQPL EQKPVDVNVL LAGMEEMLRR ALPEQVHLDI VATEGVWPTL
CDPHQLENAV LNLAINARDA MPEGGRLVVE TSNAHIGPAD LSLHSGAREG AYVCIRVTDT
GHGMPPEVAA RAFEPFFTTK PLGMGTGLGL SMIYGFARQS EGHARIVSEP GRGTTVTICL
PRYRGALSSE RASVSLPEPA RFERNETVLV VEDELVVRDL VVEVLRELGY RAIEAPDGPS
GLEIVRSSAR IDLLVTDVGL PGLNGRQLAD HARTLRPELR VLFMTGYAEN ATFGGGPLDP
DMQMITKPFP VERLAARIRE MMELS
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