| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0429 |
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| Symbol | |
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| ID | 5835171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 472590 |
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| End bp | 475940 |
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| Gene Length | 3351 bp |
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| Protein Length | 1116 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641366213 |
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| Product | tetratricopeptide TPR_4 protein |
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| Protein accession | YP_001637922 |
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| Protein GI | 163849879 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.564621 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGGGAC GGGCCGGTCA GGCAAAGCGG CGTCCGGGCA GGGCTCTCCT GCGCGCCGGC
TTCGCCGTCG GCCTCTGCGC CGCGGCCTCG GCGGCGGAGG CGGCCCGGCT CGTCTCGGCC
AAAGGCGCGC AGCCGCCGGA GGGCTTCGGC CGCATCGTCC TGACCTTCGA CGAGCCGGTC
TCCGTGAAGG CGCGGCTGTC GGGCGCGATC CTCGTGCTCA ATTTCGGCGA GGCGGTGGGG
TCCGGCCCCG AGCGGATCGC GGCGGGGATG CCGGACTACG TCACCGTGGT GCGGCGCGAC
CCCGACGGCT CGGCCCTGCG CCTCGCCCTG CAGCGGCCCT ACCGCGTCAA CGTGCAGGAT
GCCGGCGAGC AGGTCTTCAT CGATCTCCTG CCGGAAAGCT GGAACGGCTT CCTGCCGCCG
CTTCCCACCG AAGTCGTCGC CGACCTCGCC CGCCGGGCTG CCGCCGCCGA GGCCAGCCTG
AAGGCGCGCA ACCCGGCTCC TGTGCCGCGT CCGCTCACCC TCGAACTCGC CCGCACCGAT
GCCCGCACCC GGCTCTCCCT GCGCCTGCCG GCGGGCTCCG AGGCCGCCTT CGCCCCGGAT
GGCACCGGCA CGCGGCTGAC GCTGCCGGGG GCGTGGCGCA TCGACGACCA CGCCCTCCGC
GGCCGGCTCG ACCCGAATCT CGGCCGTGTC ACGGTCGAGA CGGATACCGG CGAGGCACGG
ATCGTCGCGA GCCCGGCCGA GGGCGTGACA CTCTCCACCT TGCGCGACGA AGATGTCGTG
GCGATCGATT TCGTCACCAA GCCGAAGACA CCCGAGACTG CGACGTCATC CGCTTCGCCT
GCCGGAGCCT CGGCCGGAGT TGCGAAGGAG GTGCCGAAAG AGGCCGCGCG TCCCGCTGCC
TCGAGCGCCG ACGCGTCGCC GCGGCCCGCT GCGCCTCCCG TGCTGTCGCG CAAGGCGGGC
TCGGGCCTCG TCTTCCCCTT TGCCAAGCGT GTGCCGGCGG CGTTGTTCGA GCGCGGCGGC
ATCGTCACCC TCGTCTTCGC CACGACCGAG CCGGTTGCCG TCCCGCCGCC CGGTGCCACC
GGCCTCGTCG CGCTCGCGCC GCCGCTGCGG AGCGGCGGCT TCACCATCCT TCGCTTCACT
GCGCCCGCGG GACGGCTCGT CGATCTTCTG CCCGTCACGG AGCCCGCCGG TTGGGAGCTG
GCGACCGGCG ACGGCCTTTC CCCGAGCGAG AGCCTGACCG CGCAGCGCGC CCCGACGGCC
CAGGGCCGGC TCGGCGTCAG CGTGCGGCTG CCCCAGGCCG GCCCGGCCGG CTGGCTCGAT
CTCGACGGTG AGCGCATCGC CGTCGTCACC ACCGACGGCA GCCGCCCTGC CGGCGTGGTC
AAGGCGCAGC GCTTCGTCGA GTTCGAGCTG ATTCCGAGCC GGCTCGGCCT CGCCGTTCTC
GCCAGTGCCG ACGACCTCAT CGTGCGGCCG GATCTCGACG GCGTGACGAT CGGCCGTGAG
AACGCGAGAG AGGGGACAAG GGAAGGCCGC GACGGCGGGC TTTCCGTGTC GGGCATCTCC
CGCCCCGCCG ATCCGCCCGT GGGGGCGGTC ACGGAGCTGG CGGTCGATCG CGACGCGTGG
GAGAAGGCGC AGCGCGGCGA TGTGCGCGCG ACGCTGCGGG AGGGCCTCGC CGCCGCCGTC
GAGGCCCATC GCCGCGACCG CGGCGGCGCC CGCCTCGGTC TCGCCCGGGC GATGATGGCC
AACGATCTCG ACGTGGAGGC GCTCGGTGCG CTGACCGCCG CCGCCGCCGA GGATGTGGTC
ATCGACGGCG ATCGGCAGAC GGCGCTGATG CGCGGCATCC TGCTCGCCCG GATCGGGCGG
GCCGAAGAGG CGCGTAAACT CCTCTCCGAC GAGCGGCTCG CCACCAATCC GGAAGCCCGG
CTCTGGCGCG GCTATGCCGA CGCCCTGGTC GGCCGGTGGA ACGAGGCGGC CGTCGCGCTG
CGTGCCGGCG AATCGGTCTT GGAGCGCTAC CCCGAACCCC TCGCATCGCT GTTCCACGCC
GCCGCCGCCG AGGCCGCGGT CGAGACCGGC GACTGGGAAG CGGTCACGCG TGAATCGATC
GCCGCCACCC GTGCCGCCAC CGATTACACC CGCGACCGTC TGACCCTGCT GCGGGCGAAG
ATGGACGAGG CGACCGGCCG CGGCGCGGCG GCGCTGGCGG CCTACGAGAT TCTGCGGAAT
CAAGCGCCTT GGCCGCTGGC GGCGGAGGCG ACCCTGCGGG CGGCCGTCCT CGGCCATACC
CTCGGCAAGA CGCCCCTGCC CGAAGCGATC GATCAGTTGG AGGTTCTGGC CCTGACCTGG
CACGGCGGCC CGACCGAGAT CGGGACGCTC GGCGCGCTCG GCGGCCTCTA CGAGGAGGCC
GGGCGCTGGC GCAAGATCTT CACCACCGCC CGCCGCGCCA ACGCGCTCAG CCCCGAGGCG
CCGATCGCCC GCGCGCTGCA CGAGCGGGCC CTGGCCGTGT TCGAGGATCT GTTCCTGGGC
GCGCGCGGCG AGCGGCTCGG CGGTGTCGAG GCGCTGGCGC TGTATTTCGA CTTCAAGGAT
TTCGCGCCCG CCGGCCGGCG CGCCGACGAG ATCGTACGGC GCCTCGCCGA CCGCCTCGTC
GCCCTCGATC TGCTCGAGTC CGCGGACGAG CTGCTGCAGT ACCAGATCGA TCACCGGCTT
GAGGGCACGG CCCGCTCCTC GGTCTCGGCG CGGCTCGCCA CGATCCGGCT GATGGAGGGC
AAGCCGCTCC AGGCGCTCCA GACGCTCGAC GCGACGCACC TGCCCGAGCT GCCCGAGGAT
GTGCGCCGCG CCCGCGCGAT GCTGCGCGCC CGCGCCCTGT CGGATCTCTC CCGCACCGAT
CTGGCTCTGG AGACCGTCGA GGGCGAGACC GGCGCCGATG CCGAGCGTCT GCGAGCGGAC
ATCCTGTGGG CGGCCCGGCG CTGGCGCGAG GCGGGCGAGG CGCACGAGAT GATCCTCGGG
CCGGCATGGC GCTCTGGAAA GCCCCTCGAC GACACGGCGC GAGCCGACGT CATCCGCGCC
GGCATCGCCT ACGGGCTCGC GGGCGAATCC CTCGGGCTCG AACGGCTGAA GGCGAAGTTC
GCGGGGCCGA TGGCCGAGAG CGCGGATGCC CGCACCTTCG CCATGCTGAC GCGACCCGAT
GCGCCCCGCT CCGCCGCCTT CCGCGATGCG GCCCTGCGGG CGACCAAGGC GGAGACGCTT
GCCGCCTTCC TCTCGGAGTA CCGCAAGCGC TACCCCGACA GCGCCGTTCC GGAACCCGGC
AGTGCCGCGA CGGGCAACCG CGCCGAGGCG CCGTCCCCGC CGCCGGGCTG A
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| Protein sequence | MGGRAGQAKR RPGRALLRAG FAVGLCAAAS AAEAARLVSA KGAQPPEGFG RIVLTFDEPV
SVKARLSGAI LVLNFGEAVG SGPERIAAGM PDYVTVVRRD PDGSALRLAL QRPYRVNVQD
AGEQVFIDLL PESWNGFLPP LPTEVVADLA RRAAAAEASL KARNPAPVPR PLTLELARTD
ARTRLSLRLP AGSEAAFAPD GTGTRLTLPG AWRIDDHALR GRLDPNLGRV TVETDTGEAR
IVASPAEGVT LSTLRDEDVV AIDFVTKPKT PETATSSASP AGASAGVAKE VPKEAARPAA
SSADASPRPA APPVLSRKAG SGLVFPFAKR VPAALFERGG IVTLVFATTE PVAVPPPGAT
GLVALAPPLR SGGFTILRFT APAGRLVDLL PVTEPAGWEL ATGDGLSPSE SLTAQRAPTA
QGRLGVSVRL PQAGPAGWLD LDGERIAVVT TDGSRPAGVV KAQRFVEFEL IPSRLGLAVL
ASADDLIVRP DLDGVTIGRE NAREGTREGR DGGLSVSGIS RPADPPVGAV TELAVDRDAW
EKAQRGDVRA TLREGLAAAV EAHRRDRGGA RLGLARAMMA NDLDVEALGA LTAAAAEDVV
IDGDRQTALM RGILLARIGR AEEARKLLSD ERLATNPEAR LWRGYADALV GRWNEAAVAL
RAGESVLERY PEPLASLFHA AAAEAAVETG DWEAVTRESI AATRAATDYT RDRLTLLRAK
MDEATGRGAA ALAAYEILRN QAPWPLAAEA TLRAAVLGHT LGKTPLPEAI DQLEVLALTW
HGGPTEIGTL GALGGLYEEA GRWRKIFTTA RRANALSPEA PIARALHERA LAVFEDLFLG
ARGERLGGVE ALALYFDFKD FAPAGRRADE IVRRLADRLV ALDLLESADE LLQYQIDHRL
EGTARSSVSA RLATIRLMEG KPLQALQTLD ATHLPELPED VRRARAMLRA RALSDLSRTD
LALETVEGET GADAERLRAD ILWAARRWRE AGEAHEMILG PAWRSGKPLD DTARADVIRA
GIAYGLAGES LGLERLKAKF AGPMAESADA RTFAMLTRPD APRSAAFRDA ALRATKAETL
AAFLSEYRKR YPDSAVPEPG SAATGNRAEA PSPPPG
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