| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0416 |
|---|
| Symbol | |
|---|
| ID | 5832654 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 460699 |
|---|
| End bp | 462228 |
|---|
| Gene Length | 1530 bp |
|---|
| Protein Length | 509 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641366200 |
|---|
| Product | EAL domain-containing protein |
|---|
| Protein accession | YP_001637909 |
|---|
| Protein GI | 163849866 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2200] FOG: EAL domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 0.374535 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAATGAGA AGCCCGGCCG CGGCCGCCAG ACAGAAACGC GTCGATCGAC GGTGAAAACG
CCGAAAGCCC GAACGATCCG CCCGCGCGGC ACCCCCTGGA TCCTCGGCCT CATCGGCGTC
CTGGTCCTCG TTCCGCTGGC GCTGATCCTC CCGCTCGCCG CCGTCGCCGC CGTGTCCGGC
CTCGCGATCG TCGGCGGTGC GCTGCTGTGG CGGCGGCTTT CCGCCTTCGC CGTCGCACAG
GAAGTCGTCT CGAAGGAGAT CGGCGTCCTG TCTCAGCGCC TCGTGAAACT GGAAGCCGTC
ACGGCGGCCC TGATCCAGTC GCGGATGCAG GATTCGGCGA CGGCGGACGG GTCGGCGCGG
CCGCCGGACG AGGCGGTCAA GGCGCTCGAC GCTCGGTTCA ATGCCGGGAT CGAGGAGGTG
ACCGCCGAGA TCGGCATCCT CAGCGGCATC GTTCGGGAAC TCGCCGCAGT GGTGGCGTCG
CAGGACGGCG ACATCGCCCG CCTGAGAGTC CTGGCGCAGG CTCCCCAGCC GAAGCCGGTT
CCGCAGGCGG CGCCGGAGCC GATCCGGCCG CGCCCGGCGC CGGCCGCGCC CCCTCCCCCC
GAGACGGAAC CGGTGGCACC GCCGATGCGG CTCGTGCCCC GCACAACCCT GCCGGCGGCC
CGACCCTCCG ATCATTTCGC CACCGACGCC GACGCGGCAT TGCTGATCGA GGCCTTCGAC
GGCGAGGGAC TGGAAGTGTT CCTGCAGCCG GTCGTCACCC TGCCGCAGCG CAAGGTCGTC
GCCTACGAAG CGCTGGCGCG GCTCAAGGTC GGCGACGCGG TCTACGCGCC GGAGACGTTC
CTGCCCGTCC TGGAGCGGCA CGGCCGCACG ACCGCGCTCG ACCGGCGCAT GCTCCAGCGC
GTCGCGACGA TCGCGCGCCA TCTCCAAGGC CGTGGTAGCC CAGCCTCGGT CAGCTACAGC
CTGACGCCGC ATTCGCTGTT CGAGCCGGGC TTCCTGCGCT CCCTCGGCCG CCTCGTCAGC
GAGGGGCCGG AACTCGCGGG CCGCGTGGTG ATCGCCCTGC CGCAATCGAG TTGGCGCAGC
CTCGATGCGG AGCAGGCCGC CCTTTTGGCG GGCTTGCGCG GGCGGATCGG CTTCGTGATG
GATCGACCGA TCGACCTGCG GTTCGACCCG ACCGCTCTGG CCGAGCGCGG CATCACGCAG
GTCAAGGTCG CGGCCGCGCT GCTGCTGCGA CCGCTCGACC GGGAGGCGCG GCCGGATGTC
GCCTTGGAGG ATCTGGTGAC ATCCCTGGCG CGGGCCGGAA TCCGGCTCGT CGCGACCGGG
GTCGAGGCCG AGACGGAGGT GCCGGATCTG ATCGATCTCG ACGTGCCGCT GGCGCAAGGC
GGGGTGTTCG CCGCGCCCCG TGCCGTGCGG TCGGAAGTGC TCTCGGCCTC GCCCGAGGCG
GCGCCGCCGC CACCGCCCTC CCCCGATCCA CCGCCGAGCC CGCCGCCGCA GCGTCGCCCG
TTCCGGGATT TTCTGCGCAG AGCCGGGTGA
|
|---|
| Protein sequence | MNEKPGRGRQ TETRRSTVKT PKARTIRPRG TPWILGLIGV LVLVPLALIL PLAAVAAVSG
LAIVGGALLW RRLSAFAVAQ EVVSKEIGVL SQRLVKLEAV TAALIQSRMQ DSATADGSAR
PPDEAVKALD ARFNAGIEEV TAEIGILSGI VRELAAVVAS QDGDIARLRV LAQAPQPKPV
PQAAPEPIRP RPAPAAPPPP ETEPVAPPMR LVPRTTLPAA RPSDHFATDA DAALLIEAFD
GEGLEVFLQP VVTLPQRKVV AYEALARLKV GDAVYAPETF LPVLERHGRT TALDRRMLQR
VATIARHLQG RGSPASVSYS LTPHSLFEPG FLRSLGRLVS EGPELAGRVV IALPQSSWRS
LDAEQAALLA GLRGRIGFVM DRPIDLRFDP TALAERGITQ VKVAAALLLR PLDREARPDV
ALEDLVTSLA RAGIRLVATG VEAETEVPDL IDLDVPLAQG GVFAAPRAVR SEVLSASPEA
APPPPPSPDP PPSPPPQRRP FRDFLRRAG
|
|---|
| |