| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0408 |
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| Symbol | |
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| ID | 5834668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | + |
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| Start bp | 450912 |
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| End bp | 451916 |
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| Gene Length | 1005 bp |
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| Protein Length | 334 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641366192 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_001637901 |
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| Protein GI | 163849858 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 0.406013 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGATCG GCCCAATGTT ATTCCGCAAA ACATTTCACC CTCATTGTCG CAACATGGCT
ACAGCCCCGG CACGAGGCGA AGCCCGCTCA ACCATGAGTC GGCGGGGCCT CCTCGCCGCG
GCGGTCGCCG CGATGCTTCC GATCCGCGCC CGTGCCGAAC CGGGGCGTCC AATCGTGATC
AGCTCGAAGA GCGATACCGA AGGCGCGCTG CTCGGAAACC TGATTTCTTT CGTCCTTGAG
GACCTTGGCT TGCGCGTGGA GCGCCGCCTC GGCCTCGGGC CGACCCTGAT CGTCCGCTCG
GCCCTGCTCG CCGGAGAGAT CGACCTGTAT CCCGAATATA CCGGCAACGT CGCCTTCTTC
TCCGGCACCG AGACCGATCC TGCCTGGAAG AACAGTGCCG GTGCCTACGG CCTCGCCCTG
CGGCTCGACG CCGCGCATGG TCTGGTCTGG CTCGGACAGG CGCCGGCCAA CAACACATGG
CTGATCGCGG TTCAGGGCCA TCTCGCCCGT GAGCGGGGGC TCGCCACCAT GGCGGACTTC
GCCGGCGCCG TGCGGGATGG CGTGATCCGC CTCGCCGCCT CGACGGAATT CGTGGAGAGT
CCCGCCGCCC TGCCCTCCTT CGAATCCGCC TACGGTTTCT CCCTGCCGCT CTCGCGTATC
GTCAGCCTGC CCGGCGGCGA CACGGCGGTG ACCGCGCGCG CTGCGGCGGA AGGCATCAGC
GGAATCAATG CCGGCATGGT CTACGGCACG GATGGGGCGC TGGCGGCCCT CGACCTCGCT
GTGATGAGCG ATCCCAAGGG GGCGCAGATC GTCTACGAAC CCGCCCCCGT GATCCGTGCC
GCGACGCTGG AACGCCACCC GCGGATCCGC GAGGCCCTCG ACCCGATCTT CGCGCGCCTC
GACGCCGACA CGCTGCGGCG GCTCAACGCG GCGATCACCG TGGAGGGGCG CACCGCCGAG
GCGGTGGCCA AGGCGTGGCT GGCTGAAGCA GCAAGCCGCC CGTGA
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| Protein sequence | MLIGPMLFRK TFHPHCRNMA TAPARGEARS TMSRRGLLAA AVAAMLPIRA RAEPGRPIVI
SSKSDTEGAL LGNLISFVLE DLGLRVERRL GLGPTLIVRS ALLAGEIDLY PEYTGNVAFF
SGTETDPAWK NSAGAYGLAL RLDAAHGLVW LGQAPANNTW LIAVQGHLAR ERGLATMADF
AGAVRDGVIR LAASTEFVES PAALPSFESA YGFSLPLSRI VSLPGGDTAV TARAAAEGIS
GINAGMVYGT DGALAALDLA VMSDPKGAQI VYEPAPVIRA ATLERHPRIR EALDPIFARL
DADTLRRLNA AITVEGRTAE AVAKAWLAEA ASRP
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