Gene Mext_0402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0402 
Symbol 
ID5834201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp445570 
End bp446205 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content70% 
IMG OID641366186 
Productputative deoxyribonucleotide triphosphate pyrophosphatase 
Protein accessionYP_001637895 
Protein GI163849852 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0127] Xanthosine triphosphate pyrophosphatase 
TIGRFAM ID[TIGR00042] non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCGC ACCGCATCCT CTCGGGCAAG GTCGTCATCG CGACCCACAA TGCCGGCAAG 
CTCGTGGAGA TGCGCGAGCT GCTGGCCCCG TTCGGCGTCG AGGCGGTCTC GGCCGGCGAA
CTCGGCCTTC CCGAGCCCGA CGAGACCGGC ACGATGTTCT CGGAGAACGC AGCGATCAAG
GCGCACGCCG CCGCGAAGGC CTCCGGCCTG CCGGCCTTCG CCGACGATTC CGGTCTCTGC
GTCGATGCGC TCGATGGCGC GCCGGGCCTG TTTTCCGCCC GCTGGGCCGG ACCGGACAAG
GATTTTTCCG GCGCGATGGC CCGGATCGCC GCCGAACTCG ACAAGCGCGG CGCCACGGAC
CGGCGCGCCC ACTTCGTCTC GGCTCTGGTT CTGGCATGGC CCGATGGCCA TACCGAGCTG
TTTGAGGGCC GCGTCTTCGG TGATCTGGTG GCGCCGCTCG GCAGCCTCGG CTTCGGCTAC
GATCCGATGT TCCGCCCCGA GGGCATGGAC CGCACCTTCG GCGAGATCTC CTCGGAGGAG
AAGCACGGCG TCGATTGGCA GAGCGGCAAC GCGCTCTCGC ACCGGGCGCG GGCCTTCGTG
CTACTTGCGC AGGCGTGCCT GAGGCGGCCG GGCTGA
 
Protein sequence
MSAHRILSGK VVIATHNAGK LVEMRELLAP FGVEAVSAGE LGLPEPDETG TMFSENAAIK 
AHAAAKASGL PAFADDSGLC VDALDGAPGL FSARWAGPDK DFSGAMARIA AELDKRGATD
RRAHFVSALV LAWPDGHTEL FEGRVFGDLV APLGSLGFGY DPMFRPEGMD RTFGEISSEE
KHGVDWQSGN ALSHRARAFV LLAQACLRRP G