| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0397 |
|---|
| Symbol | |
|---|
| ID | 5832063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 438633 |
|---|
| End bp | 441728 |
|---|
| Gene Length | 3096 bp |
|---|
| Protein Length | 1031 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641366181 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001637890 |
|---|
| Protein GI | 163849847 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.675147 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCTGA ACATCTCCGC CTGGGCGATC CGCAATCCGA TCGCGCCCCT CGTCCTGTTC
CTCGTGCTGG TGGTGCTCGG CCTCGTCAGC TTCCGGGGGC TCGCGGTCAC CCGCATGCCG
AACGTGGACG TGCCGATCGT CTCGGTGACG ATCACACAGG GCGGCGCCGC GCCGTCCGAG
TTGCAGACCC AAGTCACGAA ATGGGTCGAG GATTCGATCG CGGGCGTGCG CGGCGTCAAG
CACATCACAT CGGCGATCAC CGAAGGGGCC TCCGTCACCA CGGTCGAGTT CCGGCTGGAG
GTGAACACCG ACCGCGCCGT CAACGACGTG AAGGATGCGA TCTCGAAAAT CCGCATCAAC
CTGCCTCGCA CCATCGATGA GCCGGTGATC CAGCGCGTCG AGATCACCGG CCTGCCGATC
CTGATCTACG GCGTAACATC ACCCGCGATG ACGCCGGCCG ACCTGTCGTG GTTCGTCGAG
GACAAGGTCG CCCGCACGCT GCAGGGCGTG AAGGGCGTCG GCGGCGTCGA GCGCGTCGGC
GGTGTTGCCC GCGAGATCCG CATCACACCG CTGCCCGACC GGCTGCTGGC GCTCGGCATC
ACGGCCGCGG ACGTGAACAA GCAGGTCCGC GTCACCTCCG CCGATTTGGC CGGCGGGCGC
GGCGAAGTCG GCGGACGCGA GCAGTCGATC CGGACATTGG CCGCCTCGCG CACGATCCGC
GACCTGAAGG CCACCTCCAT CGTTCTGCCC GGCGGGCGCA AGGTCCGCCT CGACGACCTC
GCCACGGTCG AGGATTCGAT CGAGGAGCCG CGCACCTTCG CCCGCTTCAA CGGCGAATCC
GTCGTCGCCT TCTCGGTCTC CCGTGGCTCG GGCGCGAGCG ATGCCGAGGT TGCGGCGGGC
GTCGAGAAGA AGATTGCGGA GTTCGCCCAG GGCTACCCCG ACATCCAGTT CCAGGAGATC
GACTCCTCGG TCGCGGCGAC GCGGGGCAGC TACGCCTCGG CGATGCACAC CCTGATGGAG
GGCGCGGCCC TTGCCGTCAT CGTGGTGTTC CTGTTCCTGC GCGATTGGCG CGCCACCCTG
ATCGCGGCGG TCGCCCTGCC GCTCTCGGTC TTGCCGACCT TCTGGGCGAT GGACGCTCTG
GGCTTCACCC TCAACGGCAT CAGCCTGCTC GCAATCACGC TGGTCACCGG CATCCTCGTC
GACGACGCCA TCGTCGAGAT CGAGAACGTC GTGCGTCATA TGCGGATGGG CAAATCGCCC
TACCGCGCCT CGATCGAGGG CGCCGACGAG ATCGGGCTCG CCGTCATCGC CATTACCGCG
ACGCTGATCG CGGTCTTCGC CCCCGTCTCG TTCATGGGTG GCATCGCCGG GCGCTACTTC
ATCCAGTTCG GCCTCACCAT CGCCGTCTCG GTGTTCATGT CGCTGCTGGT GGCGCGCCTG
ATCACGCCGC TGCTCGCCGC CTACTTCCTG CGCGACCACG GCCATGCCGA GGAGCGCGAA
GGCCCGGTGA TGCGCGCCTA TACGCGCCTC GTCGGCTGGT CGGTGCGCCA CAAGTGGATC
ACCCTGATGG TTGGGCTCGC GCTGTTTGCC GGCTCGATCG TCTCGACCAA ACTTCTCCCC
TCGGGCTTCA TCCCGAAGCA GGACAACGCC CGCACTCTGT TCATGATCGA GCTGGCGCCG
GGCGCCCGGC TCCCCGACAC CATCGCGGTG GCCGACCGCG TGGTCGAGCG CATCCGCGCC
CTGCCCGAGG TCACTTCGGT CTTCGTCGAT GGCGGTCGTC AGGCCGGCGG CAAGAAAGAG
ACGCGGCTCG CCACGCTCAT CGTGAACCTG AGCCCGAAGA GCGAGCGCGT GAAGCGCCAA
TGGACCATCG AGTCCGAGAT CGCCGGGCTT CTGGCGCAGG AGCCCGACAT CCGCTCGTGG
ACCCTGCGCG ACAGCGGCCA GCGCGACCTC GCCCTCGTCG TCAGCGGCCC CGACGTCGAT
GTGGTGACGG AGGTCGCCGC GCGGCTCCAG CGCGACATGG CGGCGATCCC GCACCTCGTT
TCGGTGATGT CTACGGCGCC GCTCAACCGC ACTGAGGTGC GCATCCGCCC GAAGCCCGGC
GCCGCGGCCG ATCTCGGCGT CGCGACTGAC GTGATCGCGG AAACGGTGCG GGTCGGCACC
ATCGGCGACA TCGGCATCAA CCTCGCCAAG TTCAACGCGG CTGACCGCCA GGTGCCGATC
CGGGTGCAGC TCCCTGAGAG CGCCCGCGGC GCGATCGCGC GGCTGGAGAA CCTGAAGGTG
CCGGCCAAGA ACGGCACGGC CGTGCCGCTC GCCGCCGTGG CCGACATCGA ACTCGACCAG
GGCCCCGGCG CGATCGAGCG CTACGACCGC GCGGTGCGCG TGGCGGTCGA GGCCAATATG
GAGGGCTCGG ATGCGCTGGG CTCACTGATC GAGCAGGCGC TGGCGACCCC GACGGCGAAA
AGCCTGCCGC CGGGCGTGAC CATCCGCCAG ACCGGCGACG CCGAGATCAT GCAGGAGGTT
TTTTCGGGCT TCCTCATGGC GATGGGTGCC GGCATCATGA TGGTCTACGC GGTGCTGGTG
CTGCTGTTCG GTTCGTTCCT GCAGCCGCTC ACCATCCTGT TCTCGCTGCC GCTCTCCATC
GGCGGGGCGA TCCTCGGGCT CCTGATCTGC CACATGCCGA TCTCGATGCC GGTGGTCATC
GGCCTGCTGA TGCTGATGGG GCTGGTGACG AAGAACGCGA TCATGCTCGT GGATTTCGCG
GTCGAGGAGA TGGCCCGCGG CGTCGATCGG GTGACCGCCA TCGTCGATGC CGGCCGAAAG
CGCGCGCGGC CGATCGTGAT GACCACCATC GCCATGGCCG CCGGCATGGT CCCTTCAGCG
ATGGCGCTCG GCATCGGCGG CGAGTTCCGC GCGCCGATGG CGGTCGCGGT GATCGCCGGA
CTCATCGTCT CGACCCTGCT TTCGCTGGTC TTCGTCCCCG CGGTGTTCCT GCTGATGGAC
AGCCTCGGCG GCTTGATCGG CCGTGGGCTC GGCCGCTTCG TCGGCCCGCG CGACGAAACA
GAGGATGCAC CCGCCCCGGC CGCCCGTCAC GGCTGA
|
|---|
| Protein sequence | MRLNISAWAI RNPIAPLVLF LVLVVLGLVS FRGLAVTRMP NVDVPIVSVT ITQGGAAPSE
LQTQVTKWVE DSIAGVRGVK HITSAITEGA SVTTVEFRLE VNTDRAVNDV KDAISKIRIN
LPRTIDEPVI QRVEITGLPI LIYGVTSPAM TPADLSWFVE DKVARTLQGV KGVGGVERVG
GVAREIRITP LPDRLLALGI TAADVNKQVR VTSADLAGGR GEVGGREQSI RTLAASRTIR
DLKATSIVLP GGRKVRLDDL ATVEDSIEEP RTFARFNGES VVAFSVSRGS GASDAEVAAG
VEKKIAEFAQ GYPDIQFQEI DSSVAATRGS YASAMHTLME GAALAVIVVF LFLRDWRATL
IAAVALPLSV LPTFWAMDAL GFTLNGISLL AITLVTGILV DDAIVEIENV VRHMRMGKSP
YRASIEGADE IGLAVIAITA TLIAVFAPVS FMGGIAGRYF IQFGLTIAVS VFMSLLVARL
ITPLLAAYFL RDHGHAEERE GPVMRAYTRL VGWSVRHKWI TLMVGLALFA GSIVSTKLLP
SGFIPKQDNA RTLFMIELAP GARLPDTIAV ADRVVERIRA LPEVTSVFVD GGRQAGGKKE
TRLATLIVNL SPKSERVKRQ WTIESEIAGL LAQEPDIRSW TLRDSGQRDL ALVVSGPDVD
VVTEVAARLQ RDMAAIPHLV SVMSTAPLNR TEVRIRPKPG AAADLGVATD VIAETVRVGT
IGDIGINLAK FNAADRQVPI RVQLPESARG AIARLENLKV PAKNGTAVPL AAVADIELDQ
GPGAIERYDR AVRVAVEANM EGSDALGSLI EQALATPTAK SLPPGVTIRQ TGDAEIMQEV
FSGFLMAMGA GIMMVYAVLV LLFGSFLQPL TILFSLPLSI GGAILGLLIC HMPISMPVVI
GLLMLMGLVT KNAIMLVDFA VEEMARGVDR VTAIVDAGRK RARPIVMTTI AMAAGMVPSA
MALGIGGEFR APMAVAVIAG LIVSTLLSLV FVPAVFLLMD SLGGLIGRGL GRFVGPRDET
EDAPAPAARH G
|
|---|
| |