| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0344 |
|---|
| Symbol | |
|---|
| ID | 5832887 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 390404 |
|---|
| End bp | 391501 |
|---|
| Gene Length | 1098 bp |
|---|
| Protein Length | 365 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641366129 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_001637839 |
|---|
| Protein GI | 163849796 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4174] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCGCCT ACATCCTGCG CCGCATCGCG TTGATGATCC CGACGATCTT CGGGATCATG
CTCATCACCT TCGCGATCAT CCAGTTCGCC CCCGGTGGCC CGGTGGAGCG GGTTCTGGCC
CAGCTCCAGG GCCAGCAGGA AGGCTCGCTC TCGCGCATCA CCGGCGGCCA GGGCGATCTC
GGCGGCGGGG CGGCCCGCGG CGGCGGCGAG GCTTCGAAGT ATCGCGGCGC GCAGGGGCTC
GACCCGGCCT TCATCAAGAA GCTTGAAGCG CAGTTCGGCT TCGACAAGCC TGCCTATGAG
CGCTTCGGCA AGATGCTGTG GGACTACCTC CGCTTCGATT TCGGCCGCAG CTATTTCCGA
GACGTTTCGG TGCTGGACCT GATCAAGGAG AAGCTCCCGG TCTCGATCTC GCTCGGCCTG
TGGATGACGC TGATCTCCTA CGCGATCTCG ATCCCCCTCG GCATCCGCAA GGCGGTCGCC
GACGGTTCGC GCTTCGACGT CTGGACCTCG GCGGTCGTCA TCGTCGGCTA CGCGATCCCG
AGCTTCCTGT TCGGCATCCT CCTCGTGATC TTGTTCGCGG GCGGCTCGTT CCTGCAGATC
TTCCCGCTAC GCGGCCTCAC CTCCGAGAAT TTCGAGTCCC TGAGCCTCTG GGGCAAAGCC
CTGGACTATG CGTGGCACCT CGTGCTGCCG CTCTCCGCCC TGGTGCTTGG CGCCTTCGCC
ACCTCGACGC TGCTGACCAA GAACTCGTTC CTCGACGAGA TCCGCAAGCA ATACGTCGTC
ACCGCCCGCA TGAAGGGCGT GAGCGAGCGG CGTGTCCTTT ACGGCCACGT CTTCCGCAAT
GCGATGCTGA TCGTCATCGC CGGCTTTCCC GGTGCCTTCA TCACGGCCTT CTTCACCGGC
TCGCTGCTGA TCGAGACGAT CTTCTCGCTC GATGGGCTTG GGCTTCTGTC GTTCAGCTCC
ATCGTCGGCC GCGACTATCC GGTGGTGTTC GCCACGCTCT ACATCTTCTC CCTGCTCGGT
CTGGCGGTGA ATCTACTCTC CGACCTCACC TACACATGGA TTGATCCGCG CATCGATTTC
TCCGCGCGCG GCGCCTGA
|
|---|
| Protein sequence | MLAYILRRIA LMIPTIFGIM LITFAIIQFA PGGPVERVLA QLQGQQEGSL SRITGGQGDL
GGGAARGGGE ASKYRGAQGL DPAFIKKLEA QFGFDKPAYE RFGKMLWDYL RFDFGRSYFR
DVSVLDLIKE KLPVSISLGL WMTLISYAIS IPLGIRKAVA DGSRFDVWTS AVVIVGYAIP
SFLFGILLVI LFAGGSFLQI FPLRGLTSEN FESLSLWGKA LDYAWHLVLP LSALVLGAFA
TSTLLTKNSF LDEIRKQYVV TARMKGVSER RVLYGHVFRN AMLIVIAGFP GAFITAFFTG
SLLIETIFSL DGLGLLSFSS IVGRDYPVVF ATLYIFSLLG LAVNLLSDLT YTWIDPRIDF
SARGA
|
|---|
| |