Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0340 |
Symbol | |
ID | 5832528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 384469 |
End bp | 385212 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641366125 |
Product | 3-deoxy-D-manno-octulosonate cytidylyltransferase |
Protein accession | YP_001637835 |
Protein GI | 163849792 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase |
TIGRFAM ID | [TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 47 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGATC CCCTGATCCT GATTCCGGCC CGCCTCGCCG CGACCCGGCT GCCGTCGAAG CCGCTCGCCG ACATCGCGGG CGTGCCAATG ATCGTGCATG TCTGGCGCCG TGCCGTGGAG GCGGGAATCG GTCCCGTCGT GGTCGCCACC GACACCGACG CGGTCGCCGA GGTGATCGAG GCGCAGGGCG GGCTGGCGGT GATGACCCGG CCCGACCACC CCTCCGGCTC CGACCGTCTC GCGGAAGCGC TGGAGATCGT CGATCCCGAC GGCAATCACG ACGTCGTCGT CAACGTCCAG GGTGACCTGC CGACCATCGA CCCGGCGATC ATCGCCGCTT CGGTGATGCC GCTCGCCGAC CCGCAGGTCG ACATCGCCAC CCTCTGCGCG GTGATCCACC GGCCTGAGGA GATGGACGAT CCGAACGTGG TCAAGATCAT CGGCCACACG GTGGGACCCA ACCGTCTGCG CGCGCTCGCC TTCACCCGCG CCCGTGCTCC CTGGGGCGAC GGGCCGCTGT TCCACCATAT CGGCCTCTAC GCCTATCGCC GGAAGGCGCT CGCGCGCTTC GTCGCCCTGC CGCAGGGCGA ACTGGAGCAA CGCGAGAAGC TGGAGCAGTT GCGCGCGCTG GAGGCCGGCA TGCGCATCGA CGCGATGATC GTCGAGGACC TGCCGCTCGG CGTCGATACC CCCGCCGACC TCGAGCGCGC CCGCACGCTG CTCGCCATCC GCCGCTTGAA CTGA
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Protein sequence | MSDPLILIPA RLAATRLPSK PLADIAGVPM IVHVWRRAVE AGIGPVVVAT DTDAVAEVIE AQGGLAVMTR PDHPSGSDRL AEALEIVDPD GNHDVVVNVQ GDLPTIDPAI IAASVMPLAD PQVDIATLCA VIHRPEEMDD PNVVKIIGHT VGPNRLRALA FTRARAPWGD GPLFHHIGLY AYRRKALARF VALPQGELEQ REKLEQLRAL EAGMRIDAMI VEDLPLGVDT PADLERARTL LAIRRLN
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