Gene Mext_0334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0334 
Symbol 
ID5833574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp378193 
End bp379167 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content69% 
IMG OID641366119 
Productaliphatic sulfonate ABC transporter periplasmic ligand-binding protein 
Protein accessionYP_001637829 
Protein GI163849786 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components 
TIGRFAM ID[TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.316546 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCGAC GCCGCACCGT CCTCTCCGCC TTCGCCGGAT TGTTCGGCCT CCTCGCGACG 
GGTTCGAACC TGCGGGCTGC CGACGTCTCC GAGATCCGGC TCGATTGGGC GACCTACAAT
CCGGTCAGCC TGGTTCTGAA GGAGAAGGGC TTTCTGGAAG AGGCGCTGAA GGCCCGCGGC
ATCAAGGTGC GCTGGGTCCA GTCGCTCGGC TCCAACAAGG CGCTCGAATT CCTGAACGGC
GGCGCCATCG ATTTCGGCTC CTCGGCCGGG GCCGCCGCAC TCCTGGCGCG CATCAACGGC
AACCCGATCA AGGTCGTCTA CGCCTATTCC CGGCCGGAAT GGACCGCGCT CGTCACCCGC
AAGGAGACCG GGATCGGCAA ACCCGCCGAC CTCAAGGGCA AGCGCATCGC CGTCACCCGC
GGCACCGATC CCCACATCTT TCTGATCCGC GCCCTCCAGG GTGCCGGGCT CACCGAGAAG
GACGCCAAGC TCGTCCTGCT CCAGCACGCC GACGGCCGCA CGGCGCTCGA CCGCGGCGAC
GTCGATGCCT GGGCCGGGCT CGATCCGATG ATGGCCGCGG CCGAGATCGA GAGCGGCGAC
GTGCTGTTCC ACCGCGACGC CGCCGCCAAC ACCTGGGGCG TGCTCGACGT GCGCGAGGAC
TTCGCCAAGG CGCATCCCGA TCTCGTAAAA GTGGTTATTG CCGCCTACGA ACAGGCCCGT
GCCTACGCGC TCGCCAACCC GGACGCCCTG AAGAGCGCGC TCGTCTCGGC CACCAAGCTG
CCCGAAGCGG TCATCGCCAA GCAGATCGAG CGCACGGATC TCAGCCAGCC CGCCGTCGGT
TCGGCCCAGG CCGAAAGCAT CCGCGCCGCC GGCCTTGCCC TGCAGCAGGC GGGGGTGATC
CCCGCGTCCA CCGACGTGGC GGCGGCGGTG GAGGGTCTGA TCGATCCGCA GTTCAACCCG
GCCCCGACCC GCTGA
 
Protein sequence
MIRRRTVLSA FAGLFGLLAT GSNLRAADVS EIRLDWATYN PVSLVLKEKG FLEEALKARG 
IKVRWVQSLG SNKALEFLNG GAIDFGSSAG AAALLARING NPIKVVYAYS RPEWTALVTR
KETGIGKPAD LKGKRIAVTR GTDPHIFLIR ALQGAGLTEK DAKLVLLQHA DGRTALDRGD
VDAWAGLDPM MAAAEIESGD VLFHRDAAAN TWGVLDVRED FAKAHPDLVK VVIAAYEQAR
AYALANPDAL KSALVSATKL PEAVIAKQIE RTDLSQPAVG SAQAESIRAA GLALQQAGVI
PASTDVAAAV EGLIDPQFNP APTR