Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0334 |
Symbol | |
ID | 5833574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 378193 |
End bp | 379167 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641366119 |
Product | aliphatic sulfonate ABC transporter periplasmic ligand-binding protein |
Protein accession | YP_001637829 |
Protein GI | 163849786 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.316546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 41 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTCGAC GCCGCACCGT CCTCTCCGCC TTCGCCGGAT TGTTCGGCCT CCTCGCGACG GGTTCGAACC TGCGGGCTGC CGACGTCTCC GAGATCCGGC TCGATTGGGC GACCTACAAT CCGGTCAGCC TGGTTCTGAA GGAGAAGGGC TTTCTGGAAG AGGCGCTGAA GGCCCGCGGC ATCAAGGTGC GCTGGGTCCA GTCGCTCGGC TCCAACAAGG CGCTCGAATT CCTGAACGGC GGCGCCATCG ATTTCGGCTC CTCGGCCGGG GCCGCCGCAC TCCTGGCGCG CATCAACGGC AACCCGATCA AGGTCGTCTA CGCCTATTCC CGGCCGGAAT GGACCGCGCT CGTCACCCGC AAGGAGACCG GGATCGGCAA ACCCGCCGAC CTCAAGGGCA AGCGCATCGC CGTCACCCGC GGCACCGATC CCCACATCTT TCTGATCCGC GCCCTCCAGG GTGCCGGGCT CACCGAGAAG GACGCCAAGC TCGTCCTGCT CCAGCACGCC GACGGCCGCA CGGCGCTCGA CCGCGGCGAC GTCGATGCCT GGGCCGGGCT CGATCCGATG ATGGCCGCGG CCGAGATCGA GAGCGGCGAC GTGCTGTTCC ACCGCGACGC CGCCGCCAAC ACCTGGGGCG TGCTCGACGT GCGCGAGGAC TTCGCCAAGG CGCATCCCGA TCTCGTAAAA GTGGTTATTG CCGCCTACGA ACAGGCCCGT GCCTACGCGC TCGCCAACCC GGACGCCCTG AAGAGCGCGC TCGTCTCGGC CACCAAGCTG CCCGAAGCGG TCATCGCCAA GCAGATCGAG CGCACGGATC TCAGCCAGCC CGCCGTCGGT TCGGCCCAGG CCGAAAGCAT CCGCGCCGCC GGCCTTGCCC TGCAGCAGGC GGGGGTGATC CCCGCGTCCA CCGACGTGGC GGCGGCGGTG GAGGGTCTGA TCGATCCGCA GTTCAACCCG GCCCCGACCC GCTGA
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Protein sequence | MIRRRTVLSA FAGLFGLLAT GSNLRAADVS EIRLDWATYN PVSLVLKEKG FLEEALKARG IKVRWVQSLG SNKALEFLNG GAIDFGSSAG AAALLARING NPIKVVYAYS RPEWTALVTR KETGIGKPAD LKGKRIAVTR GTDPHIFLIR ALQGAGLTEK DAKLVLLQHA DGRTALDRGD VDAWAGLDPM MAAAEIESGD VLFHRDAAAN TWGVLDVRED FAKAHPDLVK VVIAAYEQAR AYALANPDAL KSALVSATKL PEAVIAKQIE RTDLSQPAVG SAQAESIRAA GLALQQAGVI PASTDVAAAV EGLIDPQFNP APTR
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