Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0271 |
Symbol | |
ID | 5833583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 294982 |
End bp | 295788 |
Gene Length | 807 bp |
Protein Length | 268 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 641366054 |
Product | putative restriction endonuclease |
Protein accession | YP_001637766 |
Protein GI | 163849723 |
COG category | [V] Defense mechanisms |
COG ID | [COG3440] Predicted restriction endonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.788002 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCACG CGACGCAGTC CCCGTTACCC ATGGACGATC CACCGCTGAC GGTCTGGATC AATCTCAAAC AAGCGGCCTA TAGGAACGGG TTCGGCAAAG GTTTGGATCA AGCTCACGTC GATCAGGGCT GGTATCGACT GCGTTCGACC ACTACGCCAT TTCAAGTGCA TGTGGCTGCC TCTGGCGTTA ATGGACCATG GCTCCTGGCC TATACGGAGC CACGTATCGC CGCGGACCTT CTACCTGGCA CCGCCTATCT CGGACCGAGG CCTGCCCAAA CCGGGCTTAT GCTCAACAGT CTCAGCGATC TGGCTGCGGC GCTTCTGCAA ATCTACCATT TGGTTACTGA GGCACTGAAG CCATCAGCGT ATCAGGAGTT CCTCGATCAG ACCCAATCAT TGCCTGATAC GACCGAGGCC GAAAGAGTGG CCATCGTCCG TACGGCACAG GGCATCTTCC GTCGGCATCT GGACACATAC TGGAACCAGG CTTGTGCAAT CACGGGAATG CGGGACCGAG AACTACTCAG GGCTTCGCAC ATCAAGCCAT GGACGGCCTC GAACGACTAC GAGCGGGTCG ACGTCTACAA CGGTCTCCTG CTCTCGGCAC TGTGGGACGC TGCCTTCGAC CAGGGTCTCG TCAGCTTCAG TGACGACGGC CATCTCCTCG TGAGCATGAA GCTGTCAGAT CGAGCGATCG CCGTCCTAAC CGATGGGCGG CCGGTCACGG TGCCCATCAG TGCGGGGCAT GCCCCGTATC TTAACGACCA CCGTCTACGT CACGGTTTCG CAGCGCTGGA TTCCTAG
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Protein sequence | MSHATQSPLP MDDPPLTVWI NLKQAAYRNG FGKGLDQAHV DQGWYRLRST TTPFQVHVAA SGVNGPWLLA YTEPRIAADL LPGTAYLGPR PAQTGLMLNS LSDLAAALLQ IYHLVTEALK PSAYQEFLDQ TQSLPDTTEA ERVAIVRTAQ GIFRRHLDTY WNQACAITGM RDRELLRASH IKPWTASNDY ERVDVYNGLL LSALWDAAFD QGLVSFSDDG HLLVSMKLSD RAIAVLTDGR PVTVPISAGH APYLNDHRLR HGFAALDS
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