| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0257 |
|---|
| Symbol | |
|---|
| ID | 5832734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 281179 |
|---|
| End bp | 282921 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641366040 |
|---|
| Product | superfamily II helicase |
|---|
| Protein accession | YP_001637752 |
|---|
| Protein GI | 163849709 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG5519] Superfamily II helicase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 56 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTCACTG CTCACCATGG AGATACTGTC GTGGCCACGT TCAACCTCTC ACCCCGCCTG
CGCGCACGCA TCGACAAGGG TGCGCCCGAG CCGAAGACCT CAACGGGGTC CGCTGAAAAG
CCTGCCGTTG CCGTTCGCGC CCTGATCCAT GACCTCGATC TCAACAGCTA CCTGCTGGAG
CTTCGCTTTT GGCGGATCGA TGGCGCGAAG GGCACGCTCA CGATCCCCCG CTCGCTCACC
GCGTCACCTC AGGACGTGCG GCGCATGCTC CTCGATGCGG GTGCGCTGCT GCCGCGCGAC
GCCAAGGCTG CCACCGCCCT CGTGCAGGCG CACCTCGCGC AGGATCCCCC GCAAACGCGC
GAGATCACCC GTCGGGGCGG TTGGCACGGT GACTCATTCG TCACGAATGG GCGGACGTTC
GGGCCGCAAG CGGCTTCTCT CAGCTTCGTC GGCTCGTCCA TCTTTGAGGA CCCGAGCATC
GGCATGCGTC GCGGCACGTT CGAAGGCTGG CGTTCGGGTT TGACGCCGGC CTGCGCGGCA
TCGAGCTTCC TGACCTTCGG CTTGAGCGTC GGGTACGCCG GTCCTCTGCT CGACCTCTTG
GGCGAGGACG AAGGCGCGAT CTTCAACTTC TACGGCCACA GCAGCACCGG TAAGACGTTA
ATCGCACGCT GCCTTCACTC GCAGGCGGGG CGCGCCCAGA GTTCCGATTT GCCGACCTAC
GGCATCAGCC CTCGCGGGGC CGAGGAACTC TGCTTCGCGC GAAACGACTG GGCCGTCGTC
TTCGACGAGG CGGGTCGGAC GACGGGCACG CCCGAGCAGC GTCGCGAGAA GGTCCGCAGC
ATGGCCTTCA TGGTGCCGAG CGGTCGCGGT GCGATTCGGT CGGCGCGGGT CGGGCGGCAT
CATGACTTGC CGAACCTTAC GTGGCGGCTC TTTGGCATCT CGTCGGGCGA GCGGCCGCTC
GACGAGCCGG GGACGACGCG CTTTGCCGGC GAGCAGCTTC GTCACATCGA CATCACGGTG
CCCCGCCCCG TCTACGCCGG CGTATTCGAC CGCATCGAAG GTGAGAGCGA GGATCTGCGG
GCGGAAGCAG CGCGCCTCGC CGGCGAGCTT GAGGTGGCCA TCGCCGCGAA TTACGGCCTT
GCCCGCGACC ACTACCTCGA CCGGCTGACC GCCGAGCGCG CGACGCTCGA TGCTGACGTC
CGCCGCATTG TTGACGACTT CGTCGAGCGG GTCGGGGCGA GCACGCAGCC CTGGGAGCGG
CGGCTCGCTC GCAAGTTCGG TATTGTCCTG GCCGGTGCCG TGCTAGCCGC CGAGTGGGAG
GTCGCCCCCT TCTCGCCGGA GCACGCGCAT CGCTGTGTCC TCATCATCTA CCGCAACGCT
CGCCGTGCCA TCGTCTCGGT CGAGGAGCAG ACTGGCGACG TCCTGCATCG TCTGCGGGAA
GCGCGCAGCC AAGGGTTGTT CCCGCTCCTA CAGAAGGGAG AGGCTCTTCC CGAGGATGCG
CGCGACGTGG CTTGGGGCTT TCGTCGAGAG GTGGACGGGC GCGAGATCGT AGCGGTCCTG
CCGAGTACGT TCGAGGATCT CGCGCCGTCG AAGCCGAGCG CTATCGCCGT GCTGGATACA
TTGCTCGAGA AAGGAACCGC TCTTCCCGGC CCCGACGGTA AACGGCATCG TCAGATAGCC
GTGCAAGGCT TCCCGCGCAC TGGACGCGGG CGGTGGGTCT GCCTTCTCTC GTCGAAAATC
TGA
|
|---|
| Protein sequence | MLTAHHGDTV VATFNLSPRL RARIDKGAPE PKTSTGSAEK PAVAVRALIH DLDLNSYLLE
LRFWRIDGAK GTLTIPRSLT ASPQDVRRML LDAGALLPRD AKAATALVQA HLAQDPPQTR
EITRRGGWHG DSFVTNGRTF GPQAASLSFV GSSIFEDPSI GMRRGTFEGW RSGLTPACAA
SSFLTFGLSV GYAGPLLDLL GEDEGAIFNF YGHSSTGKTL IARCLHSQAG RAQSSDLPTY
GISPRGAEEL CFARNDWAVV FDEAGRTTGT PEQRREKVRS MAFMVPSGRG AIRSARVGRH
HDLPNLTWRL FGISSGERPL DEPGTTRFAG EQLRHIDITV PRPVYAGVFD RIEGESEDLR
AEAARLAGEL EVAIAANYGL ARDHYLDRLT AERATLDADV RRIVDDFVER VGASTQPWER
RLARKFGIVL AGAVLAAEWE VAPFSPEHAH RCVLIIYRNA RRAIVSVEEQ TGDVLHRLRE
ARSQGLFPLL QKGEALPEDA RDVAWGFRRE VDGREIVAVL PSTFEDLAPS KPSAIAVLDT
LLEKGTALPG PDGKRHRQIA VQGFPRTGRG RWVCLLSSKI
|
|---|
| |