| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0186 |
|---|
| Symbol | |
|---|
| ID | 5833589 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 201258 |
|---|
| End bp | 203024 |
|---|
| Gene Length | 1767 bp |
|---|
| Protein Length | 588 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641365971 |
|---|
| Product | potassium efflux system protein |
|---|
| Protein accession | YP_001637683 |
|---|
| Protein GI | 163849640 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0475] Kef-type K+ transport systems, membrane components
[COG0569] K+ transport systems, NAD-binding component |
|---|
| TIGRFAM ID | [TIGR00932] transporter, monovalent cation:proton antiporter-2 (CPA2) family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 0.844818 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGATCG AAGCATCCGG GGCCGCGAAC GAACTCGTTC AGGTCGTCTC CCTTCTCGCC
GCGGGCGTCG TCGCCGTTCC CTTGTTCAAG CGGCTCGGGC TCGGCTCGGT CCTCGGCTAC
CTCGTGGCGG GGTTGGCCAT CGGGCCGTTC GGCGTCGGCC TCTTCACCGA TGCCCACGCG
ATCCTTCACG TCGCCGAACT CGGCGTCGTG ATGTTTCTCT TCATCATCGG ATTGGAGATG
GAGCCGTCGC GGCTCTGGGG CATGCGCCGC GAAATCTTCG GTCTCGGCCT CGCGCAGGTC
GGCGCCTGCA TCGCCGCCCT CACGCTGGTC GGCGTCGCAA TGGGGTTTCC GGTCGTCGTG
GCCTTCGTGG CCGGCACCGG CTTCGTGCTC ACCTCGACCG CTATCGTAAT GCAGCTTCTC
GAAGAGCGCG GCTCGCTCTC GACGCCGAAA GGCCAGCGGA TCGTCGCCAT CCTGCTGCTT
GAGGATCTCG CCATCGTGCC GCTGCTGGCC GCCGTCGCGC TGCTTGCGCC CGGCGGCGCC
GAGACGAGCG GGACCGAGCG CGCCATCGCC GTCGGCATCG CTCTGGTTTC CATCGCCGCG
CTCGTGGCCG CGGGCCGCTG GCTGCTCAAC CCGCTGTTCC GCCTGCTCGC CGCGGCGAAG
GCGCGGGAGG TGATGACCGC GGCAGCGCTG CTGGTCGTAC TCGGCTCGGC GTTGGCGATG
CAGCTCGGCG GCCTCTCCAT GGCGATGGGG GCCTTTCTCG CTGGTGTGCT GCTCTCGGAA
TCGAGCTTCC GCCACCAGTT GGAGGCCGAT GTCGAGCCGT TTCGCGGCAT CCTGCTCGGC
CTGTTCTTCC TCGGCGTCGG GATGTCTCTC GATCTCGCGG TGATCGCCGC GAACTGGGGC
CTGATCCTCA TGAGCGTGGC CGCCTACATG GCGGTCAAAA GCCTCGTCAT CTACGGGGTC
GCCCGCGCCC TGCGGACCAA ACATGCCGAG GCGCTGGAGC GGACGGCCCT GATGGCGCAG
GGCGGTGAAT TCGCTTTCGT GCTCTACGCG GCGGCGGCGA GTGCCGGGAT CATCGACGGC
ACGACCAACG CGATCCTGAC GGCCACCGTC ATCCTGTCGA TGGCGATCAC GCCGCTGACC
GTCATCGCCT TCGATCGCGT CGGGCCGAAG GCCACCGCGT CCACGGACGG CGTCGAAGCG
CCGGAGGATC TCGTCGGCAG CGCCTTGATC ATCGGGTTCG GCCGCTTCGG GCAGATCGTC
AGCCAGCCGC TGATCTCGCG CGGGTGCTCG GTCTCGATCA TCGACACCAA CGCCGACAAC
ATCCGCCTCG CCGAGGGGTT CGGCTTCAAG GTCTATTACG GCGATGGGGC CCGGCTCGAC
ATCCTGCGCG CGGCCGGCGC CGCGACGGCG CGGGCGATCC TGATCTGCAT TGACGACCGC
GCCATGGCCA AGCGCATCGC CGAGCTGGCG AGGGCAGAGT TTCCGCTGGT TCCGGTCCTG
GCGCGTGCCC GTGACCGCGA GCACGCGGTA GAGCTGATCG AGGCGGGTGT CGCCTACCAG
ATGCGCGAGA CGCTCGAATC GGCCTTTGCA CTGGGGGAGC AGGCGCTGGT GACGATCGGG
GCCGATCCGG ACGCGGCCGG CGAGATCATG GCCGAGGTCC GTCGGCGCGA CGCGGAGCGC
CTCGACCTGC AGGTCGTCGG CGGCCTCTAT GCCGGCCGGG AGCTGATCCG GGGGAACGCG
TCCATGCCGA CGCATGGGCA CGCGTGA
|
|---|
| Protein sequence | MAIEASGAAN ELVQVVSLLA AGVVAVPLFK RLGLGSVLGY LVAGLAIGPF GVGLFTDAHA
ILHVAELGVV MFLFIIGLEM EPSRLWGMRR EIFGLGLAQV GACIAALTLV GVAMGFPVVV
AFVAGTGFVL TSTAIVMQLL EERGSLSTPK GQRIVAILLL EDLAIVPLLA AVALLAPGGA
ETSGTERAIA VGIALVSIAA LVAAGRWLLN PLFRLLAAAK AREVMTAAAL LVVLGSALAM
QLGGLSMAMG AFLAGVLLSE SSFRHQLEAD VEPFRGILLG LFFLGVGMSL DLAVIAANWG
LILMSVAAYM AVKSLVIYGV ARALRTKHAE ALERTALMAQ GGEFAFVLYA AAASAGIIDG
TTNAILTATV ILSMAITPLT VIAFDRVGPK ATASTDGVEA PEDLVGSALI IGFGRFGQIV
SQPLISRGCS VSIIDTNADN IRLAEGFGFK VYYGDGARLD ILRAAGAATA RAILICIDDR
AMAKRIAELA RAEFPLVPVL ARARDREHAV ELIEAGVAYQ MRETLESAFA LGEQALVTIG
ADPDAAGEIM AEVRRRDAER LDLQVVGGLY AGRELIRGNA SMPTHGHA
|
|---|
| |