Gene Mext_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0185 
Symbol 
ID5833588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp200217 
End bp201155 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content68% 
IMG OID641365970 
Productpirin domain-containing protein 
Protein accessionYP_001637682 
Protein GI163849639 
COG category[R] General function prediction only 
COG ID[COG1741] Pirin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTGGC ACAGTGCGGA TGATCCGATC CCGGGCGACC ATTTCAGTTG CGACGCGATC 
CAGACCCTGA TCGTGCCGCG CTCGCGCGAT CTCGGCTCGT TTGCCGTGCG CCGCGCCCTC
CCCTCGACCC AGTGCCGGAT GGTCGGCCCG TTCATCTTCT TCGACCAGAT GGGACCGTCC
GAGTTCCTGC TCGGTCAGGG TATGGATGTC CGTCCGCACC CGCATATCGG CCTTTCGACC
GTCACCTACC TGTTCGACGG CGAAATCATG CATCGCGACA GTCTCGGCAC CGAGCTGCCG
ATCCGGCCGG GCGAACTGAA TTGGATGACG GCCGGACGCG GCATCACCCA TTCGGAGCGC
ACCGCCCCGA CCCTTCGCCA GACCGGCTCG CGCCTGTTCG GCATCCAGAG CTGGGTCGCC
CTGTCGGCTC GGGAAGAGGA AAGCGCGCCG GCCTTCGAGC ACTACGATGC CTCGGCGCTT
CCGGTCCTCA CTGGCGAGGG CAAGACCGTG CGCCTGATCG CGGGTGAAGC CTTCGGCGCG
CGCTCGCCGG TGCGGACATC GAGCCCGATG GTTTATGCCG ATGTGATGTT GGAAGCGGGC
GCCGTCCTGC CGCTCGACCC GACCTACGAC GAGCGCGCGA TCTATACGGT TGCGGGCGCC
ATCGAGATTG CCGGCGATGG CTTCGGTCCC GGCCAGCTCT TGGTGTTCCG GCCCGGCGAC
CGCATCAGCG TGCGCGCCAC CGAGGCTGCG CGATTCATGG TTCTGGGCGG CGAGCCGATG
GACGGCCCGC GGCACCTGTG GTGGAACTTC GTCTCCTCGC GGCCGGAGCG GATCGCCCAG
GCCAAGGAGG ATTGGCGCCA GGGCCGCTTC GACACGGTGC CGAACGATGC CGAATTCATC
CCGCTGCCCG AGGATCCCCC GCCCGTCCGC TATCCGTAA
 
Protein sequence
MSWHSADDPI PGDHFSCDAI QTLIVPRSRD LGSFAVRRAL PSTQCRMVGP FIFFDQMGPS 
EFLLGQGMDV RPHPHIGLST VTYLFDGEIM HRDSLGTELP IRPGELNWMT AGRGITHSER
TAPTLRQTGS RLFGIQSWVA LSAREEESAP AFEHYDASAL PVLTGEGKTV RLIAGEAFGA
RSPVRTSSPM VYADVMLEAG AVLPLDPTYD ERAIYTVAGA IEIAGDGFGP GQLLVFRPGD
RISVRATEAA RFMVLGGEPM DGPRHLWWNF VSSRPERIAQ AKEDWRQGRF DTVPNDAEFI
PLPEDPPPVR YP