| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0182 |
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| Symbol | rpsA |
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| ID | 5833115 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium extorquens PA1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010172 |
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| Strand | - |
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| Start bp | 195725 |
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| End bp | 197437 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641365966 |
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| Product | 30S ribosomal protein S1 |
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| Protein accession | YP_001637679 |
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| Protein GI | 163849636 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0539] Ribosomal protein S1 |
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| TIGRFAM ID | [TIGR00717] ribosomal protein S1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.357984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCTG GTCTGAACGT AAGCTCTTCG GCCCGCGAGG ATTTCGCGGC CCTGCTCGAG
GAATCCTTCC TCCAGCATGA GATCACCGAG GGTTCGGTCG TCAAGGGCAC CGTCGTCGGC
ATCGAGAAAG ATGTCGCCGT CATCGATATC GGTGCCAAGA CCGAGGGGCG CGTCCCCCTC
AAAGAATTCA CCGGCCCGGG CCGCGAGGGC GAGCTCAAGG TCGGCGACGA GGTCGAGGTT
TACGTCGACC GCATCGAGAA CGCGCTGGGC GAGGCCGTCA TCTCGCGCGA CAAGGCGCGC
CGCGAGGAGT CGTGGGTCAA GCTCGAGAAG GCCTTCGAGG CCAACGAGCG CGTCACCGGC
ACGATCTTCA ACCAGGTCAA GGGCGGCTAC ACCGTCGATC TCGACGGCGC CGTGGCGTTC
CTGCCGCGCT CCCAGGTCGA TATCCGCCCA GTCCGCGACG TGACCCCGCT GCTCGGCACG
CCCCAGCCGT TCCAGATCCT CAAGATGGAT CGCCGCCGCG GCAACATCGT CGTGTCGCGC
CGCACCGTGC TCGAAGAGAG CCGCGCCGAG CAGCGCTCGG AGCTGGTGGC CAACCTTGAG
GAAGGTCAGG TCATCGACGG CGTCGTCAAG AACATCACCG AGTACGGCGC CTTCGTCGAT
CTCGGCGGTA TCGACGGCCT GCTGCACGTC ACCGACATGG CGTGGCGCCG CGTGAACCAC
CCGTCCGAGG TCGTGACCAT CGGCCAGACG GTCAAGGTCA AGATCATCAA GATCAACCAC
GAGACGCACC GCATCTCGCT CGGCATCAAG CAGCTCCTGG CCGATCCGTG GGAGGGCATC
GCCGCCCGTT ACCCCGAGGA AGCCAAGCTC AAGGGCCGCG TGACCAACAT CACCGACTAC
GGCGCCTTCG TGGAGCTGGA GCCGGGGATC GAGGGCCTGA TCCACGTCTC CGAGATGAGC
TGGACCAAGA AGAACGTCCA TCCGGGCAAG ATCGTCTCCA CCTCTCAGGA GGTCGAGGTG
CAGATCCTGG AAGTCGATTC GGTCAAGCGT CGTATCTCGC TCGGCCTCAA GCAGACCCTG
CAGAACCCGT GGGATGCCTT CGCTGAGAAG CACCCGGTCG GTTCCGAGGT CGAGGGCGAG
GTCAAGAACA AGACCGAGTT CGGCCTGTTC ATCGGCCTCG AAGGCGATGT CGACGGCATG
GTTCACCTGT CGGATCTCGA CTGGAACCGT CCCGGCGAGC AGGTCATCGA GGAGTTCAAA
AAGGGCGACA TGGTGCGTGC CCAGGTTCTC GACGTCGATG TCGAGAAGGA GCGCATCTCG
CTCGGCGTGA AGCAGCTCGG CGGCGATCCC TTCGCCGAAG CCGGCGAGGT CAAGAAGGGC
CAGATCGTCA CCTGCGAGGT CGTCGAGGTG AAGGATTCCG GCCTGGAGGT GAAGCTCGTC
GACACCGACA TGCAGACCTT CATCCGCCGC GCCGAACTCG CCCGTGACCG TGGCGACCAG
CGTCCCGAGC GTTTCGCCGC CGGCGAGAAG TTCGACGCGC GCGTCATCCA GTTCGATCGC
AAGGCCCGCC GCGTGCAGGT CTCGATCAAG GCTCTGGAAG TCGCTGAGGA GAAGGAGGCG
ATGGCCCAGT TCGGCTCCGC CGATTCGGGC GCTTCGCTCG GCGACATCCT CGGTGCCGCC
TTCAACAAGA AGAAGGGTGG CGACGAGGAG TAA
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| Protein sequence | MSAGLNVSSS AREDFAALLE ESFLQHEITE GSVVKGTVVG IEKDVAVIDI GAKTEGRVPL
KEFTGPGREG ELKVGDEVEV YVDRIENALG EAVISRDKAR REESWVKLEK AFEANERVTG
TIFNQVKGGY TVDLDGAVAF LPRSQVDIRP VRDVTPLLGT PQPFQILKMD RRRGNIVVSR
RTVLEESRAE QRSELVANLE EGQVIDGVVK NITEYGAFVD LGGIDGLLHV TDMAWRRVNH
PSEVVTIGQT VKVKIIKINH ETHRISLGIK QLLADPWEGI AARYPEEAKL KGRVTNITDY
GAFVELEPGI EGLIHVSEMS WTKKNVHPGK IVSTSQEVEV QILEVDSVKR RISLGLKQTL
QNPWDAFAEK HPVGSEVEGE VKNKTEFGLF IGLEGDVDGM VHLSDLDWNR PGEQVIEEFK
KGDMVRAQVL DVDVEKERIS LGVKQLGGDP FAEAGEVKKG QIVTCEVVEV KDSGLEVKLV
DTDMQTFIRR AELARDRGDQ RPERFAAGEK FDARVIQFDR KARRVQVSIK ALEVAEEKEA
MAQFGSADSG ASLGDILGAA FNKKKGGDEE
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