Gene Mext_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0132 
Symbol 
ID5834126 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp142801 
End bp143355 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content65% 
IMG OID641365916 
Productsigma-70 region 2 domain-containing protein 
Protein accessionYP_001637630 
Protein GI163849587 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC TGATCGCAGG AGGGCTCGGC TTGGCCACGG GCCAACCGGT CGCACTCAGT 
CCGTCCAGCC TGCCCGCAGC CGTGCGGGAT CACCTTGGGC ATCAACTGCA AGCGGCCTAC
GGGGCGCTGA TCGCTGTGCA GCCGCCGCAG CGCTTGCTTG ACCTCATCGC ACAGCTCTAC
AGCGCGCTGA GCACCCACGA CCAGGAGAGC GCGGCGTCCT TCCGCCATGG CCTGATTGAG
GCTGTTCCCG GTCTGCAGGC CTTCGCAATG TCGCTGGTCG CGAACGAGGT CCGCACTGGC
GATCTCGTGC AGGAGACGCT GCTGAAGGTA TGGGCCAAGC AGGCGACGTT CGTGCCGGGC
ACGAACCTGA AGGCGTGGCT GTGCACCATT CTGCGCAACC ACTTCTACAG CGAAATCCGC
AAGTACAAGC GCGAGATCGA GGACGCGGAT GGCGCGATGG CATTGCAGCT GCAAGCGCCA
GCTTCCCAAG AGCATGGCTC GGACTTGCAG GTGGTCATGG TGTGCGTCGG AGGCGAGATC
CTCAGCCTTC CCTGA
 
Protein sequence
MDTLIAGGLG LATGQPVALS PSSLPAAVRD HLGHQLQAAY GALIAVQPPQ RLLDLIAQLY 
SALSTHDQES AASFRHGLIE AVPGLQAFAM SLVANEVRTG DLVQETLLKV WAKQATFVPG
TNLKAWLCTI LRNHFYSEIR KYKREIEDAD GAMALQLQAP ASQEHGSDLQ VVMVCVGGEI
LSLP