| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0131 |
|---|
| Symbol | |
|---|
| ID | 5834125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | + |
|---|
| Start bp | 140434 |
|---|
| End bp | 141507 |
|---|
| Gene Length | 1074 bp |
|---|
| Protein Length | 357 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641365915 |
|---|
| Product | hemolysin-type calcium-binding region |
|---|
| Protein accession | YP_001637629 |
|---|
| Protein GI | 163849586 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.258623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 44 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCATCA CTGAAGACGA CAAGTTTTAC TATATCATAG GCGATGATCA TAACTCCACG
GTTGATTATA CAACTTCTTC CAAGGCCATC CAAGTCAAGG CTGGAGGCGG CGATGATACC
ATCTACGGCA GCACCGCTGA TGATTTTATC TATGGTGACG GTGGGAATGA TACCATTTTC
GGTGGTTATG GCAAAGACTA CCTTAGCGGC GGCGACGGCG ATGATCTGAT CACGAACGGA
GGACAGCAAC CGCTGCATAC CGGAAATGAT TATGTGAGCG GCGGTGCTGG TAAAGACACT
TTGTATTTCT TGAACAGCCT GGATGGCGTC GCGCTCTATG GCGATGAGGG CGACGACTCT
ATCCAGGGTG GCATGGCTGC CGACATCATC TACGGTGACT CGGAGGTCGA CGGTGCCTCA
GACGGCAACG ACTACATTCG CGGCGGCGAG GGTGCCGATC TAATCTACGG TGGCGGCGGT
GCCGATACGA TCCGCGGCAG CTACAATGAT GGTTCGGACA AGGTGTACGG CGGGACGGGC
GATGATCTGA TCGTCTACAC CAATGACCTC TCAGCTGTGA CGCTCTACGG TGACGAGGGG
AATGACACCA TCAACGGTGG CTTCGGAGAT GATAAAATCT TCGGTGGCGC TGATAATGAC
ACCCTCTCCG GCGGCTACGG CAACGATGCC ATCGATGGCG GCACGGGCGC GGACCTGCTC
GACGGTGGGT CCGGAGCAGA TGTCCTAACC GGCGGCAGCG GTGCGGACGT TTTCATGTTC
ACGACCAAGT TCGGCAATGG CAACGTCGAT CATATCGCCG ATTTCTCGAC CGGCGATAAG
ATCTACTTGG CGAAGGGGCT GATTTCCGGC TCTAAGGCGG GACCGTTCCT TGAGTCAGCC
TTCAAGGACC TGTCCCTCGG AAGTCTCGAT GCAAACGATC GCGTTCTCTA CAACCAGACT
TCGGGCGAGC TGTCTTACGA TGCGGACGGT TCGGGTTCTG CCGCGAAGGC CGTTGTGTTC
GCTGTGCTGG ACAACCATGC CAGCCTGACG TTCCAGGACT TCCTTATTGG CTGA
|
|---|
| Protein sequence | MGITEDDKFY YIIGDDHNST VDYTTSSKAI QVKAGGGDDT IYGSTADDFI YGDGGNDTIF
GGYGKDYLSG GDGDDLITNG GQQPLHTGND YVSGGAGKDT LYFLNSLDGV ALYGDEGDDS
IQGGMAADII YGDSEVDGAS DGNDYIRGGE GADLIYGGGG ADTIRGSYND GSDKVYGGTG
DDLIVYTNDL SAVTLYGDEG NDTINGGFGD DKIFGGADND TLSGGYGNDA IDGGTGADLL
DGGSGADVLT GGSGADVFMF TTKFGNGNVD HIADFSTGDK IYLAKGLISG SKAGPFLESA
FKDLSLGSLD ANDRVLYNQT SGELSYDADG SGSAAKAVVF AVLDNHASLT FQDFLIG
|
|---|
| |