Gene Mext_0116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0116 
Symbol 
ID5835590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp122986 
End bp123396 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content56% 
IMG OID641365901 
Productcupin 2 domain-containing protein 
Protein accessionYP_001637615 
Protein GI163849572 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGCA GGCGGATGTT CACCGGTTGC GCGATCTGCG CGGCAATTGG CTTTGCGGCA 
GATGACGCTT TGGCGCAGGC CCCGAACGGG ATCAAGCGGA AGATTGCCTC GCGGATCGAC
GGTCCGATTG AGGGTTACGA GACGCTTGAA GTGTTCGTTG ATATTGAGCC GAACTTCATC
ATCGACTGGC ACACTCACCC AGGCACTGAA GCGGCTTACA CGCTGGAAGG CGACGGCGAG
CTACACATCA AAGGTGAGAC GACGAAGATG CTCAAGCCCG GATTTTCATG GCTGACGCCG
TCGGAAACCC CGCACACATT GAAGAACGGA TCGCAGGCAA CCAAGCTGTT CGTTACCTTC
ACTGTACAAA AAGGAAAGCC TCTATCGACC CCAGTTCCAG CGCCGACGTA A
 
Protein sequence
MLSRRMFTGC AICAAIGFAA DDALAQAPNG IKRKIASRID GPIEGYETLE VFVDIEPNFI 
IDWHTHPGTE AAYTLEGDGE LHIKGETTKM LKPGFSWLTP SETPHTLKNG SQATKLFVTF
TVQKGKPLST PVPAPT