Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0098 |
Symbol | |
ID | 5834688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | - |
Start bp | 102496 |
End bp | 103332 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641365883 |
Product | extracellular solute-binding protein |
Protein accession | YP_001637597 |
Protein GI | 163849554 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.155933 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTTCGT CCTTCCTTAA GGTGAGACGC GCCTTCATGG TCTCAGCCAC GTTTTTCGCT TGGTCCGGCG TCGAGGCGCG CGAGCTGCGG GTCTGCGCCG ACCCGAACAA TCTGCCCTTC TCGAACCAAG CCCGGGAGGG GTTTGAGAAT CGGATCGCCG AGGTAATCGC CCGTGATCTC GGCGCTACTC TCACCTTCAC CTGGTGGGCC CAGCGCCGGG GCTTCCTGCG CAACACCATT CTCGCCGGGC GCTGCGATCT TGTGACGGGG ATACCGGTCG GGCTCGAGAT GTTGCGACCG ACACGGCCCT ATTATCGCTC GGCTTTCGTC TTTATTGCGC GAGCTGACGG GCCCACCATC ACGTCGCTTG ATGACCCGGA ACTGGCCCGC CGCACCGTGG GCGTTCAGCT AGCTGGCAAC AACGCCGCAG GCACACCACC GGCTCAGGCC CTCGCCCGAC GCGGGCTGAC GCAGAACGTG CGCGGCTACG TCCTGACCGG GGATTACGAG AAGCCAAACC CACCGGCCCG CATCGTCGAA GCGGTGGCCA CAGGCGAGGT CGACGTCGCC CTGGCCTGGG GACCGATGGC GGGCTACTTC GCCGCCCGTA GCACGCCGCC GCTTCGCATC AGCCCAGTCG AGCCCCTCCT CGACGGACCG AAGGGTCCCA TGGTCTTCGA CATCGCCATG GGTGTGCGGC GGGAGGACGA GGATCTGCGC CGTGAGGTTG GGGCCGCCCT AGAGCGCAAC CGGACTCAGG TCGATGCCAT CCTAGCTGCC TACGACGTGC CACGGTTGGA CGTGCTGCGA GATCAAAGCG CGGCGGCTAC GCCATGA
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Protein sequence | MTSSFLKVRR AFMVSATFFA WSGVEARELR VCADPNNLPF SNQAREGFEN RIAEVIARDL GATLTFTWWA QRRGFLRNTI LAGRCDLVTG IPVGLEMLRP TRPYYRSAFV FIARADGPTI TSLDDPELAR RTVGVQLAGN NAAGTPPAQA LARRGLTQNV RGYVLTGDYE KPNPPARIVE AVATGEVDVA LAWGPMAGYF AARSTPPLRI SPVEPLLDGP KGPMVFDIAM GVRREDEDLR REVGAALERN RTQVDAILAA YDVPRLDVLR DQSAAATP
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