| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0097 |
|---|
| Symbol | |
|---|
| ID | 5834687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 101936 |
|---|
| End bp | 102499 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641365882 |
|---|
| Product | cytochrome c class I |
|---|
| Protein accession | YP_001637596 |
|---|
| Protein GI | 163849553 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.340864 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 61 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGGC GCGCAACTCT CCTGTTCGCC TCAGTCCTGG CGCTTGCTGG CTGCCAGAGA
GAGGACCGCG AGGCCCGCCC GAGCCCCGTG GGTTCCGAGA CGCAGGAACA GGTCGCCCTG
GTCACCCTGT CCCCTGGTGA GCAAGAGCCG ACCACCTATA CCAGCGGCAA GGCCCGGGAG
TTCGAGGGCA ACGCCTACCA CCTAAGCCAG GGCAAGAAGC TCTTCACCTG GTTCAATTGT
AACGGCTGCC ACGGCGGAGG CGGTGGCGGC ATAGGGCCGG CCCTGATCGA TGATCGCTGG
ATCTATGGCG GATCAATCGA GAACATTGTC CAGACCATCC GCGAGGGACG GCCCAACGGC
ATGCCCTCCT TTCGTGGGCG CCTGCCCGAC GATCAGATTT GGGAACTGGC CGCATATGTC
CGTTCAATGA GCGGCAACGC GCCCACGAGC GCGGCGCCCG CCCGCAGCGA CACCCTGCAC
CCGCACCCGT CGGAGAACCG AACGAGCCCG AGTCCACCAG TCTCCGGCGG CATCGTTCCA
CCCTCCGGCG AGATGCCCAA GTGA
|
|---|
| Protein sequence | MSWRATLLFA SVLALAGCQR EDREARPSPV GSETQEQVAL VTLSPGEQEP TTYTSGKARE
FEGNAYHLSQ GKKLFTWFNC NGCHGGGGGG IGPALIDDRW IYGGSIENIV QTIREGRPNG
MPSFRGRLPD DQIWELAAYV RSMSGNAPTS AAPARSDTLH PHPSENRTSP SPPVSGGIVP
PSGEMPK
|
|---|
| |