| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mext_0055 |
|---|
| Symbol | |
|---|
| ID | 5834199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium extorquens PA1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010172 |
|---|
| Strand | - |
|---|
| Start bp | 62921 |
|---|
| End bp | 63733 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641365839 |
|---|
| Product | transposase IS4 family protein |
|---|
| Protein accession | YP_001637554 |
|---|
| Protein GI | 163849511 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG3293] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTGGACCC CGACCACCCG GCGGCAGCAT AGCCGCTCGG GCCTGCGCTA CGAAACCGAC
CTGACGGATG CCGAATGGGC TGTGGTCGAG CCGCTGATGC CCAAGCCTGC ACCGTGCGGG
CGTCCGCCGG TCTGGACGAT GCGGGAGATC CTGAACGCGA TCTTCTACGT GCTGCGCGGC
GGGATCGCGT GGCGGCTGAT CCCCAAGGAT CTGCCACCCC GCTCGACCAC CTACGGCTAC
TTCAGCCGCT GGCGCGACGA CGGCCTGTTC GGCCGGATCA ACCACCACCT CGTCATGGCT
GACCGTGAAC GGATCGGACG CGAGGCTTCG CCGTCGGCGG CGGTTCTGGA TAGCCAGAGC
ATCAAGACCA CCGAGAGCGG TGGGCCGCGC GGCTACGATG CCGGCAAGAA GGTGAAGGGC
CGTAAGCGCC AAGCTCTGGT CGACACGGAC GGGCGTGCCC TCGTCCTCGA TCCGCAGCCC
GCCGACGTAC AGGATCGCGA CGGAGCGGTG CCGGTGCTGC GTTTGTCGCG TCGCACCTTC
CCGTTCATCA CCAAGGCGTT CGCCGATGCG GGCTATGCCG GAGACCGACC CGCCACGGCC
ACGAGCATCA CCGTCGCGAT CGTGCGCAAG CCACCCGGGC AGGTCGGCTT CGCCGTTCAA
CCGCGCCGCT GGGTCGTCGA GCGCTTCTTC GCCTGGATCA GCCGCAACCG CCGCCTCTGG
AAGGATCCGG AGGCCACTCT CGCCTCGGCC CAAGCCTTCC TCTACGCCGC CGCTGCCATG
ATCCTCGTCC GACGCCTCGG ACGCGCTTCG TGA
|
|---|
| Protein sequence | MWTPTTRRQH SRSGLRYETD LTDAEWAVVE PLMPKPAPCG RPPVWTMREI LNAIFYVLRG
GIAWRLIPKD LPPRSTTYGY FSRWRDDGLF GRINHHLVMA DRERIGREAS PSAAVLDSQS
IKTTESGGPR GYDAGKKVKG RKRQALVDTD GRALVLDPQP ADVQDRDGAV PVLRLSRRTF
PFITKAFADA GYAGDRPATA TSITVAIVRK PPGQVGFAVQ PRRWVVERFF AWISRNRRLW
KDPEATLASA QAFLYAAAAM ILVRRLGRAS
|
|---|
| |