Gene Mext_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMext_0029 
Symbol 
ID5832189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium extorquens PA1 
KingdomBacteria 
Replicon accessionNC_010172 
Strand
Start bp30407 
End bp31267 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content75% 
IMG OID641365813 
Producttriphosphoribosyl-dephospho-CoA synthase MdcB 
Protein accessionYP_001637528 
Protein GI163849485 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1767] Triphosphoribosyl-dephospho-CoA synthetase 
TIGRFAM ID[TIGR03132] triphosphoribosyl-dephospho-CoA synthase MdcB 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGC TCGCTGCGCT TCGAGCGCTT TCCCCTTGGG ATGACCGGTG CCCGGCGGCG 
GACGCGATCG CGCGGTCCGC GGCGACGGCG TTGCGGCTCG AACTCGAAAC CTACCCGAAA
CCGGGCCTCG TGAGCCATGT CGATCGCGGC AGCCATGCCG ACATGGATGC GGACACCTTC
CGGGCGAGCA CAGCAGCGAT CACGCCCTTC TTCCGCGCCC TCGCACTCGC CGGGGCGGCG
GGCGCGCCGA TGCCGGCTCT GCGCCGCATC GGCCTTGAGG CAGAAGCGGC GATGCGGGCG
GCGACCGGCG GCGTGAACAC CCATCGCGGC GCCATCTTCG GGCTCGGCCT GCTCTGCGCC
GCGGCTGGCG CCCTGAAGCG GCCGGGGGCC GGTGCGCTCG GCGCCCTCGT CTGCGAGCGC
TACGGTTCGG CGATCCTCGA CGGGCCGGTG CTGCTCCACG CGCCCGGCGC GCGGGCACGC
CGCCGGCACG GCGTCGGCGG CGCGCCGGCC GAGGCCGCCG CCGGCTTTCC GAGCCTCTAC
CGGGTCGCCC TGCCGGCCCT GCGCCGCGGC CGGCAGTGTC ATCCCGGCGA TGCGGAGGCC
GCGCGGGTCG AAGCCTGCCT CGCCCTGATC GCGCATGTCG AGGACACGAA CCTGCTGCAT
CGCGGCGGGA CGGAGGGCTT TGCCTTCGCG CGCTCTGAGG CCGCGCGGTT CCTCATTGAG
GGCGGTGTGG CGCAGCCCCG CTGGCGCGCG CGCGCCGAGG CGCTGCATCG CGCCTTCGTC
ACCCGCAACC TCAGCCCCGG CGGCGCCGCC GACCTGCTCG CGATGACGCT GTTCGTGGAA
AGCGTCGAGG CGTCCGCGTG A
 
Protein sequence
MSPLAALRAL SPWDDRCPAA DAIARSAATA LRLELETYPK PGLVSHVDRG SHADMDADTF 
RASTAAITPF FRALALAGAA GAPMPALRRI GLEAEAAMRA ATGGVNTHRG AIFGLGLLCA
AAGALKRPGA GALGALVCER YGSAILDGPV LLHAPGARAR RRHGVGGAPA EAAAGFPSLY
RVALPALRRG RQCHPGDAEA ARVEACLALI AHVEDTNLLH RGGTEGFAFA RSEAARFLIE
GGVAQPRWRA RAEALHRAFV TRNLSPGGAA DLLAMTLFVE SVEASA