Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mext_0009 |
Symbol | |
ID | 5831196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium extorquens PA1 |
Kingdom | Bacteria |
Replicon accession | NC_010172 |
Strand | + |
Start bp | 8303 |
End bp | 10504 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641365794 |
Product | RecD/TraA family helicase |
Protein accession | YP_001637509 |
Protein GI | 163849466 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0549724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACACCT CAGTCCGTCC CAGCGACCTC GATTGCGGTA CGCCCCTCGA CATGCTCGCC GGCTCGGTTG AGCGGGTGAC GTTCCACAGC GCCGAGACCG GCTTCTGCGT CCTCAAAATC CATGCCCGCG GCCGGCGCGA CCTCGTGCCG GTGGTGGGTC ACGCCCCGGC CATCGCCGCG GGCGAGTGGC TGACGGCCTC CGGGCGATGG GTCACGGACC GTGAGCACGG CCTCCAGTTC CGCGCCGACA CGCTCCAAGT GACGCCGCCC ACGGGGATCG AAGGCATCGA GCGCTACCTC GCGTCCGGGC AGATGCGCGG CATCGGCCCG ATGATGGCCA AGCGCATCGT CGCCTGCTTC GGCGAGGCGG TGTTCGAGAT CATCGAGGCC GAGCCCGCCC GCCTCACCGA GGTCGAGGGC ATCGGCCGCA AGCGCGCCGC GCGCATCGTC AAGGGCTGGG CCGAGCAGAA GGCCGTGCGG GAGATCATGA TCTTCCTGCA CGCCCACGGC GTCGGCACCG CGCGGGCGAC CCGGATCTTC CGCACGTATG GCGGGGATTC CCTGAAGGTC ATGGCCGAGG ATCCCTATCG GCTCGCCCGC GACATCCGCG GCATCGGCTT CCGCACGGCG GACGCCATCG CCCTGCGCCT TGGCCTCGCC CGCGACGCGC CGCAGCGGCT CGCTGCCGGT GTCTCCTACG CACTCCAGAC GGCGATGGAT GAGGGCCATT GCGGCCTGCC CGTCGAGCGG CTGGTGCGCC TCGCTGCCGA GCTTCTCGAC GTCGCGCCCG ATCTCGTCCG GCTCGCCGCG GCGCTCGTCC TGCGCGAGGG CCGCGAGGTC GTCGCGGATA CGCTGCGCGG CGAGCCCTGC CTGTTCCTGA AGGGCCTGCA CGGCGCCGAG CGCGTCATCG CGATGCGGCT GGCCGAGCGC GCCGCCGGCC TGCCACCCTG GGCCGCGATC GACTTCGCGC TGGCCAGGCC CTGGGTCGAG GCGAAGACCG GAAAGACGCT GTCCGCCTCG CAGGCCGAGG CGGTCGGGCT GGTGCTCCGT TCGAAGCTCT GCGTTCTCAC CGGCGGCCCC GGCGTCGGCA AGACCAGCAC CCTCGACGCG ATCCTGCGCA TCCTCACCGC CAAGGGCGTG CGGGTGCTGC TCGCCGCCCC CACCGGCCGG GCGGCCAAGC GCATGGCCGA GCAGACCGGG CTGGAAGCAC GCACGCTCCA TCGGCTGCTG GAGATCGACC CGCGCAATGG CGGCTTTCAG CGCAACGAGG ACAACCCGCT CGATTGCGAT CTCCTCGTCA TCGACGAGAC CTCGATGGTT GACGTGCCGC TGATGCATGC CCTCCTCAAA GCCGTGCCGG AGCGAGCGGG CCTGATCCTC GTCGGCGATG TCGACCAGCT TCCCTCGGTC GGACCCGGAC AGGTGCTCGC CGACGTGATT GCCTCCGGAA CCGTGCCGGT GGCGCGCCTT ACCGAGATTT TTCGCCAAGC GGCGCAGAGC CGGATCGTCG TCAACGCCCA CAGCATCAAC ACCGGGCGGA TGCCGGCTGC GCCCGCCAAG GGCGAGGACA GCGACTTCTA CCTCGTCGAG ATCGAGGACG CGGACGAGGG CGTGGAGACG CTGATCGAAC TCGTCACCCG CCGTATCCCC CGCCGCTTCG GCCTCGATCC CACCCGCGAC ATCCAAGTGT TGACGCCGAT GATCCGCGGC TCGCTCGGCA GCCGCAATCT CAACAACGCC CTTCAGCGCG TGTTGAATCC GTCGCCCTCG GCGGAGGTCG AACGCTTCGG CTGGCGCTTT GCGCCCGGCG ACCGGGTGAT GGAGACCCGC AACGACTACG ACCGCGACGT GTTCAACGGC GACCTCGGTA CGATCAGCGC CATCGACGCG GAGGACGAGG CGCTCGTGGT CGATTTCGAC GGTCGCGCGG TGATCTACCC GTTCAACGAA CTCGACACGT TGGTCCCGGC CTTCGCCACG ACGATCCACA AGGCGCAAGG CTCGGAATAT CCGGCTGTGG TGATCCCGGT GGTGACCCAG CATCGCACGA TGCTCGCGCG CAACCTGCTC TATACCGGCG TCACCCGCGG GCGCCGCCTC GTTGTGCTGA TCGGCCAGCG CCGGGCCCTT GCGATGGCGG TCCGCGAAGG GACCTCGCGG CGGCGTTGGA CCAAGCTGCG GGAGTGGCTG GACGCGGCCT GA
|
Protein sequence | MNTSVRPSDL DCGTPLDMLA GSVERVTFHS AETGFCVLKI HARGRRDLVP VVGHAPAIAA GEWLTASGRW VTDREHGLQF RADTLQVTPP TGIEGIERYL ASGQMRGIGP MMAKRIVACF GEAVFEIIEA EPARLTEVEG IGRKRAARIV KGWAEQKAVR EIMIFLHAHG VGTARATRIF RTYGGDSLKV MAEDPYRLAR DIRGIGFRTA DAIALRLGLA RDAPQRLAAG VSYALQTAMD EGHCGLPVER LVRLAAELLD VAPDLVRLAA ALVLREGREV VADTLRGEPC LFLKGLHGAE RVIAMRLAER AAGLPPWAAI DFALARPWVE AKTGKTLSAS QAEAVGLVLR SKLCVLTGGP GVGKTSTLDA ILRILTAKGV RVLLAAPTGR AAKRMAEQTG LEARTLHRLL EIDPRNGGFQ RNEDNPLDCD LLVIDETSMV DVPLMHALLK AVPERAGLIL VGDVDQLPSV GPGQVLADVI ASGTVPVARL TEIFRQAAQS RIVVNAHSIN TGRMPAAPAK GEDSDFYLVE IEDADEGVET LIELVTRRIP RRFGLDPTRD IQVLTPMIRG SLGSRNLNNA LQRVLNPSPS AEVERFGWRF APGDRVMETR NDYDRDVFNG DLGTISAIDA EDEALVVDFD GRAVIYPFNE LDTLVPAFAT TIHKAQGSEY PAVVIPVVTQ HRTMLARNLL YTGVTRGRRL VVLIGQRRAL AMAVREGTSR RRWTKLREWL DAA
|
| |