| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A4206 |
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| Symbol | atpF |
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| ID | 5802686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 4498754 |
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| End bp | 4499224 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641341973 |
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| Product | F0F1 ATP synthase subunit B |
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| Protein accession | YP_001608476 |
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| Protein GI | 162419287 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0711] F0F1-type ATP synthase, subunit b |
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| TIGRFAM ID | [TIGR01144] ATP synthase, F0 subunit b |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00000301032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 0.110777 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGAATCTTA ACGCAACAAT CCTCGGCCAG GCCATCGCGT TTGTCCTGTT TGTCATATTT
TGTATGAAGT ATGTATGGCC GCCAATTATG GCTGCTATCG AGAAGCGTCA ACAAGAAATT
GCTGACGGTC TCTCTTCTGC AGAGCGTGCC AAAAAAGATT TGGACTTAGC GCAAGCCAAT
GCGACCGACC AACTGAAGAA AGCCAAAGCA GAGGCACAGG TGATCATTGA GCAAGCAAGT
AAACGCAAAG CTCAGATCCT TGATGAAGCT AAAGCAGAAG CTGAACAGGA ACGTAACAAA
ATCGTGGCGC AAGCGCAGGC AGAGATCGAC GCCGAACGTA AGCGCGCTCG TGAAGAGTTG
CGTAAGCAAG TCGCGATGTT GGCTATAGCT GGCGCCGAGA AGATCATCGA ACGTTCCGTG
GATGAAGCTG CTAACAGCGA CATCGTTGAT AAACTGGTCG CTGAACTGTA A
|
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| Protein sequence | MNLNATILGQ AIAFVLFVIF CMKYVWPPIM AAIEKRQQEI ADGLSSAERA KKDLDLAQAN
ATDQLKKAKA EAQVIIEQAS KRKAQILDEA KAEAEQERNK IVAQAQAEID AERKRAREEL
RKQVAMLAIA GAEKIIERSV DEAANSDIVD KLVAEL
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