Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A4202 |
Symbol | atpD |
ID | 5802682 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4494187 |
End bp | 4495569 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641341969 |
Product | F0F1 ATP synthase subunit beta |
Protein accession | YP_001608472 |
Protein GI | 162421072 |
COG category | [C] Energy production and conversion |
COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.16362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.223697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTACTG GAAAGATTAT CCAGGTAATC GGCGCCGTAG TGGACGTCGA ATTCCCCCAA GACGCTGTAC CAAAAGTGTA CAACGCCCTT GAGGTAGAAG GTACAACTGA AAAGTTAGTG CTGGAAGTTC AGCAACAGTT GGGCGGTGGT GTTGTTCGTT GTATCGCAAT GGGCTCTTCC GATGGTCTGA GCCGTGGGTT GAAAGTAACC AACCTAGAAC ACCCGATCGA AGTACCGGTT GGTAAAGCGA CCCTTGGCCG TATCATGAAC GTATTGGGTG AACCAATCGA CATGAAAGGT CCTATCGGTG AAGAAGAGCG TTGGGCAATC CATCGCGAAG CGCCTTCTTA TGAAGAGCTT GCTAGCTCAC AAGATCTGTT AGAAACCGGT ATCAAGGTTA TGGACCTGAT TTGTCCGTTT GCTAAGGGCG GTAAAGTCGG TCTGTTCGGT GGTGCGGGTG TAGGTAAAAC AGTAAACATG ATGGAGCTGA TCCGTAACAT CGCGATCGAG CACTCTGGGT ATTCTGTATT TGCCGGTGTA GGTGAGCGTA CCCGTGAGGG TAATGACTTC TACCATGAAA TGACTGACTC CAACGTTTTG GACAAAGTAT CCTTGGTTTA CGGCCAGATG AATGAGCCAC CAGGTAACCG TCTACGCGTT GCACTGACCG GCCTGACCAT GGCGGAGAAA TTCCGTGATG AAGGTCGTGA CGTACTGCTG TTTATCGATA ATATCTATCG TTATACCCTA GCTGGTACGG AAGTATCCGC ATTGCTGGGT CGTATGCCAT CAGCGGTAGG TTATCAGCCA ACACTGGCTG AAGAGATGGG TGTGTTGCAG GAACGTATTA CTTCCACTAA GACGGGTTCA ATCACCTCTG TTCAGGCCGT TTATGTACCT GCGGATGACT TGACTGACCC ATCACCAGCA ACCACCTTTG CTCACTTGGA TGCAACCGTC GTTCTGAGTC GTCAAATCGC CTCTCTGGGT ATTTATCCAG CGGTTGACCC ACTTGACTCT ACCAGCCGTC AGCTTGATCC GTTGGTTGTT GGTCAGGAGC ACTACGATGT AGCGCGTGGC GTGCAGTCTA TTCTGCAACG TTACCAAGAG CTGAAAGATA TCATCGCGAT CTTGGGTATG GACGAGTTGT CAGAAGATGA CAAACTGGTG GTATCCCGTG CGCGTAAGAT TCAGCGCTTC CTGTCTCAAC CGTTCTTTGT GGCTGAAGTC TTCACCGGTT CACCGGGCAA GTTTGTGTCG CTGAAAGATA CCATTCGTGG TTTCAAAGGC ATCATGAATG GCGACTATGA CCACTTGCCG GAACAGGCGT TCTACATGGT TGGTACCATT GAAGAAGCAG TGGAAAAAGC CAAGAAACTG TAA
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Protein sequence | MATGKIIQVI GAVVDVEFPQ DAVPKVYNAL EVEGTTEKLV LEVQQQLGGG VVRCIAMGSS DGLSRGLKVT NLEHPIEVPV GKATLGRIMN VLGEPIDMKG PIGEEERWAI HREAPSYEEL ASSQDLLETG IKVMDLICPF AKGGKVGLFG GAGVGKTVNM MELIRNIAIE HSGYSVFAGV GERTREGNDF YHEMTDSNVL DKVSLVYGQM NEPPGNRLRV ALTGLTMAEK FRDEGRDVLL FIDNIYRYTL AGTEVSALLG RMPSAVGYQP TLAEEMGVLQ ERITSTKTGS ITSVQAVYVP ADDLTDPSPA TTFAHLDATV VLSRQIASLG IYPAVDPLDS TSRQLDPLVV GQEHYDVARG VQSILQRYQE LKDIIAILGM DELSEDDKLV VSRARKIQRF LSQPFFVAEV FTGSPGKFVS LKDTIRGFKG IMNGDYDHLP EQAFYMVGTI EEAVEKAKKL
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