Gene YpAngola_A4201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A4201 
SymbolatpC 
ID5802681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4493743 
End bp4494165 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content50% 
IMG OID641341968 
ProductF0F1 ATP synthase subunit epsilon 
Protein accessionYP_001608471 
Protein GI162420709 
COG category[C] Energy production and conversion 
COG ID[COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) 
TIGRFAM ID[TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.110385 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value0.374799 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGCAA TGACTTACCA TCTGGATGTT GTGAGCGCCG AGAAGAAAAT GTTCTCAGGC 
GTGGTACAAA AGATTCAGGT GACGGGTAGT GAAGGTGAAC TGGGTATTTT CCCTGGGCAC
GCCCCACTGC TCACTGCCAT CAAGCCTGGC ATGATACGTA TCGTTAAACA GTTCGGTGAG
GAAGAGTTTA TTTATCTTTC TGGCGGCATC CTTGAGGTGC AACCGAGCGT TGTGATCGTA
TTGGCTGACA CAGCTATTCG TGGGCTGGAT CTGGACGAAG CAAGAGCGCT GGAATCTAAG
CGTAAAGCAG AAGCCCATAT TAATAACTCC CACGGCGATG TCGACTATGC TCAGGCATCC
GCTGAATTGG CGAAGGCGAT TGCGAAACTA CGCGTAATTG AGCTAACCAA GAAAGCGATG
TAA
 
Protein sequence
MAAMTYHLDV VSAEKKMFSG VVQKIQVTGS EGELGIFPGH APLLTAIKPG MIRIVKQFGE 
EEFIYLSGGI LEVQPSVVIV LADTAIRGLD LDEARALESK RKAEAHINNS HGDVDYAQAS
AELAKAIAKL RVIELTKKAM