Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A4192 |
Symbol | |
ID | 5802672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4483491 |
End bp | 4484123 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641341959 |
Product | hypothetical protein |
Protein accession | YP_001608462 |
Protein GI | 162419762 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1664] Integral membrane protein CcmA involved in cell shape determination |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.719656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.00623524 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGTGGGGCC TGTGGGTTGC GGCTTTAGTG GCCTATGCTA TCTACGATTT GTTTTTCTAT CTTTTTATCG TCCCTGCATT ATTCCTCATC TTTACAGTGA GTAATGTTAT GTTCAAAAAG AAAGTAAATA GTAATAATGA CGGTTCTTCT AGCGTAAATA TCCCTAGCCA AACGAGTATG CCATTATCTA ATGCTTCACA GGAAAATGCT AAAAACAATA CTATTATTGC CGCAGGTACA CAGTTGAAAG GCAATATTAA TCTGGATGGT GATATTCAGA TTTATGGTGT GGTGATGGGG GATATCATCG TCAATGAAGG TTCAATCAGA TTAATGCGTA GTGGGCAGAT TGAGGGAAAT TTAACTGCCC CCCATATTAC GGTTGATGGC AGGGTTGAAG GGGTTTGTAT TTCTGATGAT CTGGAAATTC TGGAACATGG TCGCTTAAAA GGTATCGTGA AGGGCAGTAA TTTCTCAATC AAAAAGGGCG GTATTTTTGT TGGTCAGTCG GAGATTACGG AAGAACCGGT TAGCCAAGTC AAGAGTAAAG CCAAGCCAGT TATCGCCATA AGTCAGGATA AAGCTAAAGC AGAGGACGTC GCTGCCGGCC AGCACAGCAG TAACGTTTCT TGA
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Protein sequence | MWGLWVAALV AYAIYDLFFY LFIVPALFLI FTVSNVMFKK KVNSNNDGSS SVNIPSQTSM PLSNASQENA KNNTIIAAGT QLKGNINLDG DIQIYGVVMG DIIVNEGSIR LMRSGQIEGN LTAPHITVDG RVEGVCISDD LEILEHGRLK GIVKGSNFSI KKGGIFVGQS EITEEPVSQV KSKAKPVIAI SQDKAKAEDV AAGQHSSNVS
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