Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A4189 |
Symbol | |
ID | 5802669 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 4480740 |
End bp | 4481495 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641341956 |
Product | polar amino acid ABC transporter permease |
Protein accession | YP_001608459 |
Protein GI | 162421147 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0765] ABC-type amino acid transport system, permease component |
TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.532965 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.0122809 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTA CCATTATCGT TGATAACTGG CGTTATCTGC TGTGGGGGAC TTTCCCTGAT GGCCCTCTGG GAGGGGCGGC ATTGACCGTG GTGATCAGTA TCATGGCTGG GGTAGCCTCA GCCGTATTAG GCACTGTGTT GGGCGTGGCA TTGGCGATGT CCCGTGGTGT CTGGGCGGGA ATATTGGCCG CTGTTTTGGG CTTCTTCCGT GCGATTCCGG TGATTATGTT GATTTTTTGG ACGTATTTCC TGCTACCGAT CGTTTTTGGT GTGGATATAC CTGAAATCAC CACTGTGGTG TGTGCACTGG CGCTGATTGC TTCTGCTTAT CTGGCTCATG CGGTAAAGGC CGGGATAATG GCTATTGGTG CCGGGCAGTG GCAAGCGGGG CTGTCGTTAG GTTTTAATCG CTGGCAGACC CTGTGGTTTA TTGTATTGCC ACAAGCGCTG CGCATGATGG TGCCGTCCTT TATTAATCAA TGGATATCAT TGATTAAAGA TACATCGCTG GCTTATATCG TCGGAGTGAA TGAGCTGACC TTTTTGGCTA CACAGGTTAA TAACCGCAGT ATGGTTTACC CGATGGAAGT CTTTCTGTTT GTGGCATTGG TCTATTTTGT TTTATGTCTG GCGCTGGATC TACTGGCTAA CGGCCTTAAT CGCCGCTTTA GCCCACAGCA TGCCATTAAA AACCAAAGCT CCATGGCACG TTCATGGCGC TGGTGGTGTA ACAAGCTAAC ACTGCAATCG AGTTAA
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Protein sequence | MDFTIIVDNW RYLLWGTFPD GPLGGAALTV VISIMAGVAS AVLGTVLGVA LAMSRGVWAG ILAAVLGFFR AIPVIMLIFW TYFLLPIVFG VDIPEITTVV CALALIASAY LAHAVKAGIM AIGAGQWQAG LSLGFNRWQT LWFIVLPQAL RMMVPSFINQ WISLIKDTSL AYIVGVNELT FLATQVNNRS MVYPMEVFLF VALVYFVLCL ALDLLANGLN RRFSPQHAIK NQSSMARSWR WWCNKLTLQS S
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