Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A4183 |
Symbol | trmE |
ID | 5802663 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4473491 |
End bp | 4474855 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641341951 |
Product | tRNA modification GTPase TrmE |
Protein accession | YP_001608454 |
Protein GI | 162421232 |
COG category | [R] General function prediction only |
COG ID | [COG0486] Predicted GTPase |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000380111 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.0649437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACCA CTGATACTAT CGTGGCCCAA GCAACGCCCC CTGGTCGTGG CGGTGTCGGC ATTCTACGTG TTTCAGGTCG TGCTGCCTCA GAGGTTGCAC ACGCCGTTCT GGGTAAATTA CCTAAGCCAC GTTATGCCGA TTATCTGCCG TTTAAAGACG TGGATGGCAG CACGCTGGAT CAAGGTATCG CTCTCTATTT CCCCGGTCCA AATTCTTTCA CTGGCGAAGA TGTATTAGAG CTGCAAGGCC ATGGTGGGCC GGTGATACTG GATTTACTGT TAAAACGCAT TCTGGCCCTG CCAGGGCTGC GTATTGCCCG CCCAGGGGAG TTTTCCGAGC GTGCCTTCCT CAACGACAAG CTGGACTTAG CACAGGCTGA AGCCATTGCC GACCTGATCG ACGCCAGTTC AGAGCAAGCA GCACGTTCGG CAGTAAACTC ATTGCAAGGC GCATTTTCAG CGCGTATCCA TCAATTGGTG GAAGCACTTA CTCACCTGAG AATCTACGTT GAAGCTGCCA TTGACTTTCC AGATGAGGAA ATTGACTTCC TTTCTGATGG CAAAATCGAA GGCCAACTGA ATGGTGTCAT GGCCGATCTG GAACAGGTAC GTACTGAGGC TAGACAAGGC AGCTTACTAC GTGAAGGGAT GAAAGTGGTG ATTGCTGGCC GGCCAAACGC AGGGAAATCC AGTTTACTCA ATGCGTTAGC TGGCCGTGAA GCGGCGATTG TAACGGATAT CGCGGGCACC ACCCGTGATG TTTTACGGGA ACACATTCAT ATTGATGGGA TGCCTTTACA TATCATTGAT ACCGCAGGGT TGCGGGAAGC CAATGACGAA GTTGAGCGCA TTGGCATTGA ACGCGCGTGG AACGAGATAG AACAGGCTGA TCGTGTATTG TTTATGGTGG ATGGCACCAC CACCGATGCC ACCGAACCTG CGGCTATCTG GCCAGAGTTT ATGGCACGCT TACCGGCAAC ACTGCCCATC ACTGTGGTAC GCAATAAAGC GGATATAACA GGTGAAACGC TGGGGCTGAC CAAAGTGAAT GGTCACTCAC TTATTCGCCT GTCGGCACGC ACTGGAGAAG GTATTGACCT GCTGCGTGAC CATTTAAAAC AAAGTATGGG CTTTACCAGC AACACTGAAG GCGGTTTCCT GGCTCGACGT CGCCATTTAC AGGCACTGGA GACTGCCGCC AGGCATTTGA TACAAGGCCA TGAGCAGTTA GTGAGCGCTT ACGCTGGTGA ATTACTGGCA GAAGAACTGC GTTTAGCACA ACAATCATTG AGTGAAATTA CCGGTGAATT TAGTTCTGAT GACTTACTGG GGCGGATTTT TTCCAGTTTC TGTATCGGAA AATGA
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Protein sequence | MSTTDTIVAQ ATPPGRGGVG ILRVSGRAAS EVAHAVLGKL PKPRYADYLP FKDVDGSTLD QGIALYFPGP NSFTGEDVLE LQGHGGPVIL DLLLKRILAL PGLRIARPGE FSERAFLNDK LDLAQAEAIA DLIDASSEQA ARSAVNSLQG AFSARIHQLV EALTHLRIYV EAAIDFPDEE IDFLSDGKIE GQLNGVMADL EQVRTEARQG SLLREGMKVV IAGRPNAGKS SLLNALAGRE AAIVTDIAGT TRDVLREHIH IDGMPLHIID TAGLREANDE VERIGIERAW NEIEQADRVL FMVDGTTTDA TEPAAIWPEF MARLPATLPI TVVRNKADIT GETLGLTKVN GHSLIRLSAR TGEGIDLLRD HLKQSMGFTS NTEGGFLARR RHLQALETAA RHLIQGHEQL VSAYAGELLA EELRLAQQSL SEITGEFSSD DLLGRIFSSF CIGK
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