Gene YpAngola_A4173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A4173 
Symbol 
ID5802653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4463046 
End bp4463855 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content48% 
IMG OID641341941 
Productsugar phosphatase 
Protein accessionYP_001608444 
Protein GI162418656 
COG category[R] General function prediction only 
COG ID[COG0561] Predicted hydrolases of the HAD superfamily 
TIGRFAM ID[TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.729204 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.0085653 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTATTG AACTGATCGC TATTGATATG GATGGCACGT TGCTGAATCC ACAGCATGAA 
ATTACGCCAC GGGTAAAGCA GGCGATTGCT GCTGCCAGGG CTAAAGGCGT CTGTGTGGTG
CTGGCCACTG GTCGGCCTTA TATTGGGGTT CAACGTTATT TACGTGAACT GAATATGGAG
AACAGTGGCG ATTATTGCAT CAGTAACAAC GGTGCATTAG TACAAAAGGC GGCGACTGGC
GAGTGTATTT TACAAGAGAC TCTCAGTTTT GAGGATTATC TCTATTTTGA AGCGTTATCC
CGTGAGTTGG GGGTTAGTTT CCAGGCCTTT GATTTCAATA CATTATATAC CGCCAACAAG
GACATCAGTA AATATACGCT TCATGAAGTG ATGTTGACGG GGATCCCTCT GAAGTACCGG
GCAGTAGAGG AGATGGATCC AACATTACGT TTCCCTAAAG TGATGATGAT TGATGAGCCA
GAGCGGTTGG ATCGTGCATT GGCTATGATG CCTGCCGAAG TATTTGAGCG TTTTACTATT
ATGAAGAGTG CGCCATTTTA TCTGGAAATC CTGAGTAAGC GGGCGGATAA AGGTACTGGC
GTGAAAATGC TGGCTGAGCA TTTAGGCATT GCGCAGAAAA ATGTCATGGC GTTGGGTGAT
CAGGGGAATG ACATCGCAAT GGTTAACTAC GCCGGAGTGG GGGTTGCCAT GGGGAATGCG
ATCCCTGAGC TGAAGGAGAT AGCGCAGTAT GTGACGGGGA CCAACTGCGA GGATGGTGTG
GCGACTGCGA TTGAGAAGTA TATTGGCTGA
 
Protein sequence
MAIELIAIDM DGTLLNPQHE ITPRVKQAIA AARAKGVCVV LATGRPYIGV QRYLRELNME 
NSGDYCISNN GALVQKAATG ECILQETLSF EDYLYFEALS RELGVSFQAF DFNTLYTANK
DISKYTLHEV MLTGIPLKYR AVEEMDPTLR FPKVMMIDEP ERLDRALAMM PAEVFERFTI
MKSAPFYLEI LSKRADKGTG VKMLAEHLGI AQKNVMALGD QGNDIAMVNY AGVGVAMGNA
IPELKEIAQY VTGTNCEDGV ATAIEKYIG