Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A4172 |
Symbol | |
ID | 5802652 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 4461870 |
End bp | 4462655 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641341940 |
Product | integrase core subunit |
Protein accession | YP_001608443 |
Protein GI | 162418129 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.00421914 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGGCACGCA GTACATACTA TTATCATGCA TCGAAACCGG ACGGTGTAAT TGATGACTAT GCAGATGCGG TAAAAGCGAT TGGCGCCCTA AGCAGACGAC ACGCACAGCG CTACGGTTAT CGCCGGATGA CGGTCGCACT GAGAAAAGAA GGGTTCACAC TGAATCACAA AACGGTGCGA AAACTGATGA ATCAGCACGG GTTACTCAGC CTCATTCGGC GGAAAAAATA TCGCTCCTAT AGGGCCGATG GTGGCCGGGC ATCCGATAAT CTATTGGCTC GTAATTTTAC ATCCGAAATC AGTGGATTGA AGTGGTGTAC AGATGTCACA GAGTTCCGAG TTGGAGCACA GAAGCTGTAT TTGTCGGTGA TACAAGACCT GTTTAATAAT GAGATTATTT CTTGGCATAT GTCAGAAAGA GCAGCATTAA TCCTGACGTG CAAGACGCTG GAAAAAGCGC TGAAAGTGAA AGGGAGAAAA GAAGGCCTGA TGTTGCACAG CGATCAGGGC TGGCATTACC GAACGCCGAT GTGGCGCTCA ATGCTTGTCG AGGCGGGGAT AAGGCAAAGT ATGTCACGCA AAGGCAATTG TTTAGATAAT GCAGTGATGG AAAATTTCTT CAGTCACCTG AAAGCCGAGA TGTATCACCG TAAGAAGTAC GATTCAGCCA CAGTTTTAAA GCGTGACATT GTAGAATATA TCCATTATTA CAATACAGAG CGCATTAGCC TGAAAACAGG CGGAATGAGT CCGGCAGAAT ACCGGACTCA GGTAGAAAAG CAGTAA
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Protein sequence | MARSTYYYHA SKPDGVIDDY ADAVKAIGAL SRRHAQRYGY RRMTVALRKE GFTLNHKTVR KLMNQHGLLS LIRRKKYRSY RADGGRASDN LLARNFTSEI SGLKWCTDVT EFRVGAQKLY LSVIQDLFNN EIISWHMSER AALILTCKTL EKALKVKGRK EGLMLHSDQG WHYRTPMWRS MLVEAGIRQS MSRKGNCLDN AVMENFFSHL KAEMYHRKKY DSATVLKRDI VEYIHYYNTE RISLKTGGMS PAEYRTQVEK Q
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