Gene YpAngola_A4171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A4171 
Symbol 
ID5802651 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4461280 
End bp4461816 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content48% 
IMG OID641341939 
Producttransposase 
Protein accessionYP_001608442 
Protein GI162419172 
COG category[L] Replication, recombination and repair 
COG ID[COG2963] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.00382773 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGATCTGGA GGTTCGGTTC AATGAAACAC CCTTTTTCAA CCCGCCTAGC GGCGGTTCAA 
CATTACCTTT CAGGAAAGGC CACTCTGCGG GAAACCGCAC GTCAATTCAG TGTTGGCAAA
TCCCCTCTTA CGCGTTGGAT CCGAGCTTTT CGCCGTCAAG GTGAGGCTGG ACTGGAGCAC
CATCTTTCCA GAACTTATAC TCCAGAATTC AGGCTTTGCG TTGTCCGCTA TATGATGGCA
AACAGATGTA GCGCTGCCGA TGCTTCTGCT CATTTTAACA TTCCCAACGA GACGATTATC
CAAAACTGGA TGAAACGTTA TCGAGAGGGA GGAAAAGAAG CGCTTAACCC ATCGAAAACG
GGTCCTACTA TGCCAAAAGA TAAATATGAG CACGATTCAA AACCGTTCAG CGAGATGACG
CATGCGGAGC TAGAGAAAGA ACTTGAGTAT CTGCGCGCGG AAAACGCTTA TCTAAAAAAG
CGGAAAGCCC TGAGAGAAGA AAAGGCACTC AGGGAGCAGC AGAAAAAACC AGAATAG
 
Protein sequence
MIWRFGSMKH PFSTRLAAVQ HYLSGKATLR ETARQFSVGK SPLTRWIRAF RRQGEAGLEH 
HLSRTYTPEF RLCVVRYMMA NRCSAADASA HFNIPNETII QNWMKRYREG GKEALNPSKT
GPTMPKDKYE HDSKPFSEMT HAELEKELEY LRAENAYLKK RKALREEKAL REQQKKPE