| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A4164 |
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| Symbol | |
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| ID | 5802644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | - |
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| Start bp | 4455082 |
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| End bp | 4455810 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641341934 |
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| Product | pili assembly chaperone protein |
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| Protein accession | YP_001608437 |
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| Protein GI | 162420235 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.00562333 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | TTGTGGGCAA AGACAGCGCT ATTCGGGATA GCCTTGTGGC TCACTGCGCT AACCAGCCAG
GCGGCAATTA ACCTGGATCG GACACGTATT ATCTTTAATA GTACTGATAA ATCAGCCAGT
GTTATTTTGC AAAACCAGAG CCCGTCATCA CCTTATTTGG CGCAATCTTG GTTGGAAAAT
ACCAAAGGCC AAAAAATAGA GAGTCCATTG GTGGCTTTAC CCCCTATGCA GCGGATTGAT
GCCGGGCAAA AAAGCCAGGT TCGGATCATG AAACTACCGG ATGCCGATAA ATTACCCACT
GATCGCGAGA CATTATTCTA TTTCAATGTG CGGGAAATCC CACCGCAAAG CGAAATGAAT
AATGTCGTAC AAATTGCGAT TCAAAATCGG ATAAAGCTGT TTTATCGGCC CATGGCTATC
AAAGCGAATT ATAGCGATAT CTGGCAAGAG AAATTACAGA TCAGTAAACT AGTGGGGGGG
CTTAAAATTA ATAACCCTAC ACCTTATTAC ATTACGTTGG CTTATTTGAG TCAGAATGAA
CAAGGTAACT TTCCTGGTTT TGACAGCGTC ATGATTGCGC CTTTTGGTAC TGAGTTTGTT
AAAACGCCGG GTTATAGCGG TAGCCGTTAT AACGTTGGTT ATATGGATGA TTTTGGGGGC
ATTGTGATAC GCACTTTTAA CTGTTTATCA GCAGAATGCC AAATTCAGCC AGCTGAAAAG
AGAAGGTGA
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| Protein sequence | MWAKTALFGI ALWLTALTSQ AAINLDRTRI IFNSTDKSAS VILQNQSPSS PYLAQSWLEN
TKGQKIESPL VALPPMQRID AGQKSQVRIM KLPDADKLPT DRETLFYFNV REIPPQSEMN
NVVQIAIQNR IKLFYRPMAI KANYSDIWQE KLQISKLVGG LKINNPTPYY ITLAYLSQNE
QGNFPGFDSV MIAPFGTEFV KTPGYSGSRY NVGYMDDFGG IVIRTFNCLS AECQIQPAEK
RR
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