| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A4143 |
|---|
| Symbol | |
|---|
| ID | 5802623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 4434932 |
|---|
| End bp | 4435885 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641341919 |
|---|
| Product | iron chelate ABC transporter periplasmic iron-binding protein |
|---|
| Protein accession | YP_001608423 |
|---|
| Protein GI | 162418432 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG4607] ABC-type enterochelin transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0242829 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.0341564 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGATTAC GTTTAGCTTT ATTTTCGTCA TTACTGGCGG CAACCTTTGC GATAACAGGC
TGTGATCAAT CGTCAGAAAC CCCTGACAAT GCAGCAACAA TCAGTATTGA ACATGCACAG
GGAACAACGC TGGTTCCGCT AAACCCACAA AAAGTCGTCA TACTGAACCC ATCAGTGCTG
GATAACGCTG ACGCCCTACA CATCAAGGTA GCCGGTGTTC CACAGACCAG CACACATCTA
CCAGCCTTTT TATCTAAGTA CAGCGGCCCT GAGTATATGA ATACCGGGAC ACTGTTTGAA
CCCGATTATG AAGCACTCAG TCAGGCTAAA CCTGACCTGA TCATCGCGGG TGGGCGTGCT
CAAGATGCTT ATAACAAACT CAGTGCTATC GCTCCAACTA TCGCGCTTGA TGTTGATACT
CAGCACTTTA CCCAGAGCCT TACCCAGCGT ACTGAGCAAC TGGCCTCAAT ATTTGGCAAA
GAAGAAGAAG CCAAAACACT GCTTGGTAAT TTCTCATCAC AGGTAAACGC GATAAAGCAG
AAATCGGCTA ACGCTGGCTC GGCAATGGTA TTGATGATCA GCGGTGGAAA AATGTCGGCT
TACACCCCCG GTTCCCGTTT TGGTTTTATT TTTGACGAAC TGGGATTCAC ACCTGCGGCC
ACCTTTGCTG AATCAGGCCG CCACGGAAAT GTGGTGACAT CAGAATTCAT TCTTAATGCT
AATCCTGACT GGCTGTTCGT CCTTGACCGC GACAATGCGA TTGGCCGGAC TGAAGGGCAA
TCCGCACAAC AGGTCCTCGA TAACCCGCTG ATCCATAAAA CTAAAGCATG GCAAAACGAT
CGCATTGTTT ATCTCGATTC TGCCTCACTC TATATTGCCG GGGGTGTGCA AAGTTATACA
CAACTGATGA ATAAGGTGAG CGCAATACTG GATAAGCCAG TATCAGAGCA GTAA
|
|---|
| Protein sequence | MRLRLALFSS LLAATFAITG CDQSSETPDN AATISIEHAQ GTTLVPLNPQ KVVILNPSVL
DNADALHIKV AGVPQTSTHL PAFLSKYSGP EYMNTGTLFE PDYEALSQAK PDLIIAGGRA
QDAYNKLSAI APTIALDVDT QHFTQSLTQR TEQLASIFGK EEEAKTLLGN FSSQVNAIKQ
KSANAGSAMV LMISGGKMSA YTPGSRFGFI FDELGFTPAA TFAESGRHGN VVTSEFILNA
NPDWLFVLDR DNAIGRTEGQ SAQQVLDNPL IHKTKAWQND RIVYLDSASL YIAGGVQSYT
QLMNKVSAIL DKPVSEQ
|
|---|
| |