Gene YpAngola_A4098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A4098 
SymbolrbsB6 
ID5802577 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp4371365 
End bp4372309 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content51% 
IMG OID641341876 
Productsugar-binding transport protein 
Protein accessionYP_001608382 
Protein GI162421167 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1879] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones47 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones50 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTTGA AACCCATAAT GACCGCACTA ATCGCGGGGG CCATGATAGC CAGTTCACCG 
GCGCTCCAGG CGAAAGAGTT GAACTCGATA GGCGTAACGG TGGGCGATCT TGCCAACCCA
TTTTTCGTGC AAATCACCAA AGGTGTGGAG TTAGAAGCGC GTAAGTTGGC CGGCGATAAA
GTCAAAGTTA CGCTCGTTTC CAGCGGCTAC GATCTCGGCA AGCAGGTGGC ACAGATAGAT
AACTTTATTG CCGCCAAAGT GGACATGATC ATTCTCAATG CCGCGGATTC TAAAGGGATC
GGTCCGGCGG TGAAGCGTGC TAAAGATGCC GGTATTGTCG TGGTGGCAGT GGATGTGGCA
GCAGAAGGGG CTGACGCAAC GATTACCTCT GACAACACTC AGGCCGGTGC GATGGCGTGT
AAGTACATAT CCGACCGTCT GAAAGAGAAA GGCAACGTGG TTATTATCAA CGGGCCGCCA
GTGTCTGCCA TACAAAACCG TGTTGAAGGT TGTGAAAGCG AATTCAAAAA ATATCCTGAT
ATCAAGGTCC TTTCTTCTAA CCAAAATGCT AAGGGCAGTC GAGAAGGTGG CCTGGAGGTG
ATGACCTCCT TGCTGGCGGT GAACCCGAAG ATCGATGGCG TGTTTGCCAT CAATGATCCA
ACGGCGATTG GGGCTGATTT GGCTGCCAAA CAGGCACAAC GTAATGAATT CTTTATTGTT
GGTGTGGACG GCAGCCCGGA TGCAGAAGAA GCGCTGAAAC GGGGTGGTAA CACATTGTTT
GTCGCGACCC CAGCGCAAGA TCCTCAGGTC ATGGCCTCCA AAGCCGTTGA GGTTGGTTAT
GGCATCTTGC AGGGCAACCC AGCACCAAAA GATCCCATTT TGATACCAGT GACCCTGATC
GACAAAAATA ATATCAGCAC TTACAAAGGC TGGACGATGA AATAA
 
Protein sequence
MRLKPIMTAL IAGAMIASSP ALQAKELNSI GVTVGDLANP FFVQITKGVE LEARKLAGDK 
VKVTLVSSGY DLGKQVAQID NFIAAKVDMI ILNAADSKGI GPAVKRAKDA GIVVVAVDVA
AEGADATITS DNTQAGAMAC KYISDRLKEK GNVVIINGPP VSAIQNRVEG CESEFKKYPD
IKVLSSNQNA KGSREGGLEV MTSLLAVNPK IDGVFAINDP TAIGADLAAK QAQRNEFFIV
GVDGSPDAEE ALKRGGNTLF VATPAQDPQV MASKAVEVGY GILQGNPAPK DPILIPVTLI
DKNNISTYKG WTMK