| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A4086 |
|---|
| Symbol | |
|---|
| ID | 5802565 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 4353221 |
|---|
| End bp | 4355263 |
|---|
| Gene Length | 2043 bp |
|---|
| Protein Length | 680 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641341865 |
|---|
| Product | oligopeptidase A |
|---|
| Protein accession | YP_001608371 |
|---|
| Protein GI | 162420283 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0339] Zn-dependent oligopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 0.902618 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACC CGCTGTTGAC TCCGTTCTCC CTGCCACCGT TTTCTGCTAT TCGGCCTGAA
GATATCGTGC CTGCGGTGAA ATCCGCGCTG GATGAATGCC GTCAAGCGGT AGAGCGTGTG
GTTGCCCAAT CAGGGCCGTT CACCTGGGAT AATCTGTGTC AGCCACTGGC CGAATCCGAT
GACCGCTTAT CGCGCATTTG GTCACCCGTA GGCCACTTGA ACTCAGTAAA AAATAGCCCT
GAGCTGCGTA CCGCTTATGA ACAAAGCTTG CCATTGCTGT CGGAATACGG CACTTGGGTG
GGGCAGCATA AAGGTTTGTA TCAGGCGTAT GTCAGCCTGA AAGAGGGGCC GGGTTTTGCC
GCCTTGACCG CACCGCAGCG CAAAGCGGTA GAAAATGCTC TGCGTGACTT CCAGCTATCC
GGTATTGGTC TGGCGCCTGA ACAACAAAAG CGTTACGGCG AAATCGTGGC TCGCTTGTCG
GAGCTTGGCT CGACTTACAG CAATAACGTG CTTGATGCCA CCATGGGGTG GAGCAAACTG
ATTACCGATG TTGAGCAACT GAAAGGTTTG CCAGAAAGCG CGCTCGCAGC GGCCAAAGCC
ATGGCAGAAG CCAAAGAGCA GGACGGCTGG TTGCTGACAC TGGATATGCC AAGCTATCTG
CCGGTACTGA CTTATGCCGA TAACGTGGAA TTGCGCGAAG AGATGTACCG TGCATTTGCC
ACCCGTGCTT CTGATCAGGG GCCAAACGCG GGGAAATGGG ATAACAGCGA GATCATGGCG
GAAATTCTGA CACTGCGTCA TGAATTAGCG CAGTTGCTCG GTTTTAACAG TTATGCCGAT
AAATCGCTGG CCACCAAAAT GGCAGAAAAC CCACAGCAGG TATTGGGCTT CCTGAACGAT
CTGGCGAAGC GCGCCCGCCC GCAAGCAGAA GAAGAGCTGG CTCAGTTACG TGCTTTTGCT
AAAGAGCATT ATGGTGTCAG TGAACTCCAG GCTTGGGATA TCACCTATTA TTCCGAGAAA
CAGAAACAGC ATCTGTTTGC TATCAGTGAT GAACAACTTC GTCCTTATTT CCCGGAACAG
CGGGTGGTGG AAGGTTTATT CGAAGTGGTG AAACGCATTT ATGGCATTAC AGCCAAAGAG
CGCCATGATG TCGATACCTG GCATCCGGAT GTCCGCTTCT TCGATTTGTT TGATGCCGAT
GGTGAACTGC GCGGTAGCTT CTACCTTGAT TTGTATGCGC GCGAAAACAA GCGTGGCGGA
GCCTGGATGG ATGACTGCGT AGGTAGCCTG CGTTTGGCTA ATGGCCAACT GCAAAAACCA
GTCGCTTATC TGACTTGCAA TTTTAACGGG CCCGTTGGCG GCAAACCGGC GCTGTTTACT
CACAATGAAG TGACCACCTT GTTCCATGAG TTCGGCCATG GTTTACATCA TATGCTGACC
AAAATTGATA CCGCAGGCGT TTCTGGTATC AATGGCGTGC CTTGGGATGC AGTCGAGCTG
CCAAGTCAGT TTATGGAAAA CTGGTGCTGG GAGCCGGAGG CGCTGGCCTT TATTTCTGGT
CATTACCAAA CTCATGAGCC TTTGCCGCAA GAGATGCTGG ATAAACTACT GGCGGCGAAA
AACTATCAGG CGGCGTTGTT TATTCTGCGC CAACTGGAGT TTGGTCTGTT CGATTTCCGG
ATGCATTATG AGTTCGACCC GCTGACCGGT GCGCAGATCC TGCCTATTTT GTATGAAGTG
AAAAAACAGG TTGCTGTGGT GCCATCACCG GAATGGGGCC GCTTCCCTCA TGCCTTCAGC
CATATTTTTG CTGGCGGTTA TGCGGCCGGT TATTACAGCT ATTTATGGGC TGAAGTGCTC
TCGGCGGATG CGTTCTCACG CTTTGAAGAA GAAGGGATTT TTAATGCCGC TACCGGTCAG
TCCTTCCTCG ACAACATTCT GTCTCAAGGT GGCTCAGAGG AGCCAATGAC ACTGTTCAAA
CGCTTCCGTG GCCGTGAACC GCAGTTAGAT GCCATGTTGC GTCATTACGG TATTAAGGGC
TAA
|
|---|
| Protein sequence | MTNPLLTPFS LPPFSAIRPE DIVPAVKSAL DECRQAVERV VAQSGPFTWD NLCQPLAESD
DRLSRIWSPV GHLNSVKNSP ELRTAYEQSL PLLSEYGTWV GQHKGLYQAY VSLKEGPGFA
ALTAPQRKAV ENALRDFQLS GIGLAPEQQK RYGEIVARLS ELGSTYSNNV LDATMGWSKL
ITDVEQLKGL PESALAAAKA MAEAKEQDGW LLTLDMPSYL PVLTYADNVE LREEMYRAFA
TRASDQGPNA GKWDNSEIMA EILTLRHELA QLLGFNSYAD KSLATKMAEN PQQVLGFLND
LAKRARPQAE EELAQLRAFA KEHYGVSELQ AWDITYYSEK QKQHLFAISD EQLRPYFPEQ
RVVEGLFEVV KRIYGITAKE RHDVDTWHPD VRFFDLFDAD GELRGSFYLD LYARENKRGG
AWMDDCVGSL RLANGQLQKP VAYLTCNFNG PVGGKPALFT HNEVTTLFHE FGHGLHHMLT
KIDTAGVSGI NGVPWDAVEL PSQFMENWCW EPEALAFISG HYQTHEPLPQ EMLDKLLAAK
NYQAALFILR QLEFGLFDFR MHYEFDPLTG AQILPILYEV KKQVAVVPSP EWGRFPHAFS
HIFAGGYAAG YYSYLWAEVL SADAFSRFEE EGIFNAATGQ SFLDNILSQG GSEEPMTLFK
RFRGREPQLD AMLRHYGIKG
|
|---|
| |